Gene : Carub.0003s3501 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3501
Name:  ? Carub.0003s3501 Secondary Identifier:  ? PAC:39241230
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3501 0.5kb upstream 0.5kb upstream 2105 true scaffold_3: 14838940-14841044 Capsella rubella
Carub.0003s3501 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14838940-14839439 Capsella rubella
Carub.0003s3501 0.5kb downstream 0.5kb downstream 2105 true scaffold_3: 14839440-14841544 Capsella rubella
Carub.0003s3501 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14841045-14841544 Capsella rubella
Carub.0003s3501 1.0kb upstream 1.0kb upstream 2605 true scaffold_3: 14838440-14841044 Capsella rubella
Carub.0003s3501 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14838440-14839439 Capsella rubella
Carub.0003s3501 1.0kb downstream 1.0kb downstream 2605 true scaffold_3: 14839440-14842044 Capsella rubella
Carub.0003s3501 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14841045-14842044 Capsella rubella
Carub.0003s3501 2.0kb upstream 2.0kb upstream 3605 true scaffold_3: 14837440-14841044 Capsella rubella
Carub.0003s3501 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14837440-14839439 Capsella rubella
Carub.0003s3501 2.0kb downstream 2.0kb downstream 3605 true scaffold_3: 14839440-14843044 Capsella rubella
Carub.0003s3501 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14841045-14843044 Capsella rubella
Carub.0003s3501 5.0kb upstream 5.0kb upstream 6605 true scaffold_3: 14834440-14841044 Capsella rubella
Carub.0003s3501 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14834440-14839439 Capsella rubella
Carub.0003s3501 5.0kb downstream 5.0kb downstream 6605 true scaffold_3: 14839440-14846044 Capsella rubella
Carub.0003s3501 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14841045-14846044 Capsella rubella
Carub.0003s3501 10.0kb upstream 10.0kb upstream 11605 true scaffold_3: 14829440-14841044 Capsella rubella
Carub.0003s3501 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14829440-14839439 Capsella rubella
Carub.0003s3501 10.0kb downstream 10.0kb downstream 11605 true scaffold_3: 14839440-14851044 Capsella rubella
Carub.0003s3501 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14841045-14851044 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370537 5261 Brassicaceae View MSA
123839556 5264 Brassicales-Malvales View MSA
124344392 5266 SBM View MSA
124243300 5268 Malvidae View MSA
124072342 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain