Gene : Carub.0003s3508 C. rubella v1.1
Defline:  (1 of 19) KOG1792 - Reticulon Genomic Order:  3508
Name:  ? Carub.0003s3508 Secondary Identifier:  ? PAC:39240873
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3508 0.5kb upstream 0.5kb upstream 2852 true scaffold_3: 14869085-14871936 Capsella rubella
Carub.0003s3508 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14871437-14871936 Capsella rubella
Carub.0003s3508 0.5kb downstream 0.5kb downstream 2852 true scaffold_3: 14868585-14871436 Capsella rubella
Carub.0003s3508 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14868585-14869084 Capsella rubella
Carub.0003s3508 1.0kb upstream 1.0kb upstream 3352 true scaffold_3: 14869085-14872436 Capsella rubella
Carub.0003s3508 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14871437-14872436 Capsella rubella
Carub.0003s3508 1.0kb downstream 1.0kb downstream 3352 true scaffold_3: 14868085-14871436 Capsella rubella
Carub.0003s3508 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14868085-14869084 Capsella rubella
Carub.0003s3508 2.0kb upstream 2.0kb upstream 4352 true scaffold_3: 14869085-14873436 Capsella rubella
Carub.0003s3508 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14871437-14873436 Capsella rubella
Carub.0003s3508 2.0kb downstream 2.0kb downstream 4352 true scaffold_3: 14867085-14871436 Capsella rubella
Carub.0003s3508 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14867085-14869084 Capsella rubella
Carub.0003s3508 5.0kb upstream 5.0kb upstream 7352 true scaffold_3: 14869085-14876436 Capsella rubella
Carub.0003s3508 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14871437-14876436 Capsella rubella
Carub.0003s3508 5.0kb downstream 5.0kb downstream 7352 true scaffold_3: 14864085-14871436 Capsella rubella
Carub.0003s3508 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14864085-14869084 Capsella rubella
Carub.0003s3508 10.0kb upstream 10.0kb upstream 12352 true scaffold_3: 14869085-14881436 Capsella rubella
Carub.0003s3508 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14871437-14881436 Capsella rubella
Carub.0003s3508 10.0kb downstream 10.0kb downstream 12352 true scaffold_3: 14859085-14871436 Capsella rubella
Carub.0003s3508 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14859085-14869084 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381114 5261 Brassicaceae View MSA
123830467 5264 Brassicales-Malvales View MSA
124345713 5266 SBM View MSA
124243328 5268 Malvidae View MSA
124065493 5270 Rosid View MSA
123740273 5271 Pentapetalae View MSA
122786766 5272 Eudicot View MSA
122045341 5273 Angiosperm View MSA
121349821 5274 Embryophyte View MSA
123424485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain