Gene : Carub.0003s3520 C. rubella v1.1
Defline:  (1 of 1) 2.5.1.9 - Riboflavin synthase Genomic Order:  3520
Name:  ? Carub.0003s3520 Secondary Identifier:  ? PAC:39242724
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella RIBOSYN2-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3520 0.5kb upstream 0.5kb upstream 2089 true scaffold_3: 14906121-14908209 Capsella rubella
Carub.0003s3520 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14906121-14906620 Capsella rubella
Carub.0003s3520 0.5kb downstream 0.5kb downstream 2089 true scaffold_3: 14906621-14908709 Capsella rubella
Carub.0003s3520 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14908210-14908709 Capsella rubella
Carub.0003s3520 1.0kb upstream 1.0kb upstream 2589 true scaffold_3: 14905621-14908209 Capsella rubella
Carub.0003s3520 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14905621-14906620 Capsella rubella
Carub.0003s3520 1.0kb downstream 1.0kb downstream 2589 true scaffold_3: 14906621-14909209 Capsella rubella
Carub.0003s3520 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14908210-14909209 Capsella rubella
Carub.0003s3520 2.0kb upstream 2.0kb upstream 3589 true scaffold_3: 14904621-14908209 Capsella rubella
Carub.0003s3520 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14904621-14906620 Capsella rubella
Carub.0003s3520 2.0kb downstream 2.0kb downstream 3589 true scaffold_3: 14906621-14910209 Capsella rubella
Carub.0003s3520 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14908210-14910209 Capsella rubella
Carub.0003s3520 5.0kb upstream 5.0kb upstream 6589 true scaffold_3: 14901621-14908209 Capsella rubella
Carub.0003s3520 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14901621-14906620 Capsella rubella
Carub.0003s3520 5.0kb downstream 5.0kb downstream 6589 true scaffold_3: 14906621-14913209 Capsella rubella
Carub.0003s3520 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14908210-14913209 Capsella rubella
Carub.0003s3520 10.0kb upstream 10.0kb upstream 11589 true scaffold_3: 14896621-14908209 Capsella rubella
Carub.0003s3520 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14896621-14906620 Capsella rubella
Carub.0003s3520 10.0kb downstream 10.0kb downstream 11589 true scaffold_3: 14906621-14918209 Capsella rubella
Carub.0003s3520 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14908210-14918209 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360568 5261 Brassicaceae View MSA
123834076 5264 Brassicales-Malvales View MSA
124342348 5266 SBM View MSA
124237548 5268 Malvidae View MSA
124067605 5270 Rosid View MSA
123749559 5271 Pentapetalae View MSA
122790279 5272 Eudicot View MSA
122043158 5273 Angiosperm View MSA
121344512 5274 Embryophyte View MSA
123423798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain