Gene : Carub.0003s3299 C. rubella v1.1
Defline:  (1 of 1) PTHR10906//PTHR10906:SF9 - SECY/SEC61-ALPHA FAMILY MEMBER // PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC Genomic Order:  3299
Name:  ? Carub.0003s3299 Secondary Identifier:  ? PAC:39240254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3299 0.5kb upstream 0.5kb upstream 2939 true scaffold_3: 13964004-13966942 Capsella rubella
Carub.0003s3299 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13966443-13966942 Capsella rubella
Carub.0003s3299 0.5kb downstream 0.5kb downstream 2939 true scaffold_3: 13963504-13966442 Capsella rubella
Carub.0003s3299 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13963504-13964003 Capsella rubella
Carub.0003s3299 1.0kb upstream 1.0kb upstream 3439 true scaffold_3: 13964004-13967442 Capsella rubella
Carub.0003s3299 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13966443-13967442 Capsella rubella
Carub.0003s3299 1.0kb downstream 1.0kb downstream 3439 true scaffold_3: 13963004-13966442 Capsella rubella
Carub.0003s3299 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13963004-13964003 Capsella rubella
Carub.0003s3299 2.0kb upstream 2.0kb upstream 4439 true scaffold_3: 13964004-13968442 Capsella rubella
Carub.0003s3299 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13966443-13968442 Capsella rubella
Carub.0003s3299 2.0kb downstream 2.0kb downstream 4439 true scaffold_3: 13962004-13966442 Capsella rubella
Carub.0003s3299 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13962004-13964003 Capsella rubella
Carub.0003s3299 5.0kb upstream 5.0kb upstream 7439 true scaffold_3: 13964004-13971442 Capsella rubella
Carub.0003s3299 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13966443-13971442 Capsella rubella
Carub.0003s3299 5.0kb downstream 5.0kb downstream 7439 true scaffold_3: 13959004-13966442 Capsella rubella
Carub.0003s3299 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13959004-13964003 Capsella rubella
Carub.0003s3299 10.0kb upstream 10.0kb upstream 12439 true scaffold_3: 13964004-13976442 Capsella rubella
Carub.0003s3299 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13966443-13976442 Capsella rubella
Carub.0003s3299 10.0kb downstream 10.0kb downstream 12439 true scaffold_3: 13954004-13966442 Capsella rubella
Carub.0003s3299 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13954004-13964003 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363653 5261 Brassicaceae View MSA
123829565 5264 Brassicales-Malvales View MSA
124340391 5266 SBM View MSA
124241538 5268 Malvidae View MSA
124063230 5270 Rosid View MSA
123738518 5271 Pentapetalae View MSA
122788956 5272 Eudicot View MSA
122046659 5273 Angiosperm View MSA
121346087 5274 Embryophyte View MSA
123425781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain