Gene : Carub.0003s3301 C. rubella v1.1
Defline:  (1 of 3) K11097 - small nuclear ribonucleoprotein E (SNRPE, SME) Genomic Order:  3301
Name:  ? Carub.0003s3301 Secondary Identifier:  ? PAC:39242179
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3301 0.5kb upstream 0.5kb upstream 2202 true scaffold_3: 13973109-13975310 Capsella rubella
Carub.0003s3301 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13973109-13973608 Capsella rubella
Carub.0003s3301 0.5kb downstream 0.5kb downstream 2202 true scaffold_3: 13973609-13975810 Capsella rubella
Carub.0003s3301 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13975311-13975810 Capsella rubella
Carub.0003s3301 1.0kb upstream 1.0kb upstream 2702 true scaffold_3: 13972609-13975310 Capsella rubella
Carub.0003s3301 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13972609-13973608 Capsella rubella
Carub.0003s3301 1.0kb downstream 1.0kb downstream 2702 true scaffold_3: 13973609-13976310 Capsella rubella
Carub.0003s3301 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13975311-13976310 Capsella rubella
Carub.0003s3301 2.0kb upstream 2.0kb upstream 3702 true scaffold_3: 13971609-13975310 Capsella rubella
Carub.0003s3301 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13971609-13973608 Capsella rubella
Carub.0003s3301 2.0kb downstream 2.0kb downstream 3702 true scaffold_3: 13973609-13977310 Capsella rubella
Carub.0003s3301 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13975311-13977310 Capsella rubella
Carub.0003s3301 5.0kb upstream 5.0kb upstream 6702 true scaffold_3: 13968609-13975310 Capsella rubella
Carub.0003s3301 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13968609-13973608 Capsella rubella
Carub.0003s3301 5.0kb downstream 5.0kb downstream 6702 true scaffold_3: 13973609-13980310 Capsella rubella
Carub.0003s3301 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13975311-13980310 Capsella rubella
Carub.0003s3301 10.0kb upstream 10.0kb upstream 11702 true scaffold_3: 13963609-13975310 Capsella rubella
Carub.0003s3301 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13963609-13973608 Capsella rubella
Carub.0003s3301 10.0kb downstream 10.0kb downstream 11702 true scaffold_3: 13973609-13985310 Capsella rubella
Carub.0003s3301 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13975311-13985310 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361604 5261 Brassicaceae View MSA
123836946 5264 Brassicales-Malvales View MSA
124339965 5266 SBM View MSA
124250319 5268 Malvidae View MSA
124065170 5270 Rosid View MSA
123753789 5271 Pentapetalae View MSA
122788242 5272 Eudicot View MSA
122042193 5273 Angiosperm View MSA
121347325 5274 Embryophyte View MSA
123424375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain