Gene : Carub.0003s3386 C. rubella v1.1
Defline:  (1 of 3) K01489 - cytidine deaminase (cdd, CDA) Genomic Order:  3386
Name:  ? Carub.0003s3386 Secondary Identifier:  ? PAC:39242508
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6556 Capsella rubella pathologic  
Crubella PWY-7193 Capsella rubella pathologic  
Crubella PWY-7196 Capsella rubella pathologic  
Crubella PWY-7199 Capsella rubella pathologic  
Crubella PWY-7200 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3386 0.5kb upstream 0.5kb upstream 1660 true scaffold_3: 14359195-14360854 Capsella rubella
Carub.0003s3386 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14360355-14360854 Capsella rubella
Carub.0003s3386 0.5kb downstream 0.5kb downstream 1660 true scaffold_3: 14358695-14360354 Capsella rubella
Carub.0003s3386 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14358695-14359194 Capsella rubella
Carub.0003s3386 1.0kb upstream 1.0kb upstream 2160 true scaffold_3: 14359195-14361354 Capsella rubella
Carub.0003s3386 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14360355-14361354 Capsella rubella
Carub.0003s3386 1.0kb downstream 1.0kb downstream 2160 true scaffold_3: 14358195-14360354 Capsella rubella
Carub.0003s3386 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14358195-14359194 Capsella rubella
Carub.0003s3386 2.0kb upstream 2.0kb upstream 3160 true scaffold_3: 14359195-14362354 Capsella rubella
Carub.0003s3386 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14360355-14362354 Capsella rubella
Carub.0003s3386 2.0kb downstream 2.0kb downstream 3160 true scaffold_3: 14357195-14360354 Capsella rubella
Carub.0003s3386 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14357195-14359194 Capsella rubella
Carub.0003s3386 5.0kb upstream 5.0kb upstream 6160 true scaffold_3: 14359195-14365354 Capsella rubella
Carub.0003s3386 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14360355-14365354 Capsella rubella
Carub.0003s3386 5.0kb downstream 5.0kb downstream 6160 true scaffold_3: 14354195-14360354 Capsella rubella
Carub.0003s3386 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14354195-14359194 Capsella rubella
Carub.0003s3386 10.0kb upstream 10.0kb upstream 11160 true scaffold_3: 14359195-14370354 Capsella rubella
Carub.0003s3386 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14360355-14370354 Capsella rubella
Carub.0003s3386 10.0kb downstream 10.0kb downstream 11160 true scaffold_3: 14349195-14360354 Capsella rubella
Carub.0003s3386 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14349195-14359194 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364002 5261 Brassicaceae View MSA
123839427 5264 Brassicales-Malvales View MSA
124337492 5266 SBM View MSA
124238889 5268 Malvidae View MSA
124068161 5270 Rosid View MSA
123744425 5271 Pentapetalae View MSA
122793352 5272 Eudicot View MSA
122048037 5273 Angiosperm View MSA
121343942 5274 Embryophyte View MSA
123424852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain