Gene : Carub.0003s3030 C. rubella v1.1
Defline:  (1 of 4) K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) Genomic Order:  3030
Name:  ? Carub.0003s3030 Secondary Identifier:  ? PAC:39241731
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3030 0.5kb upstream 0.5kb upstream 1942 true scaffold_3: 12804917-12806858 Capsella rubella
Carub.0003s3030 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12806359-12806858 Capsella rubella
Carub.0003s3030 0.5kb downstream 0.5kb downstream 1942 true scaffold_3: 12804417-12806358 Capsella rubella
Carub.0003s3030 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12804417-12804916 Capsella rubella
Carub.0003s3030 1.0kb upstream 1.0kb upstream 2442 true scaffold_3: 12804917-12807358 Capsella rubella
Carub.0003s3030 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12806359-12807358 Capsella rubella
Carub.0003s3030 1.0kb downstream 1.0kb downstream 2442 true scaffold_3: 12803917-12806358 Capsella rubella
Carub.0003s3030 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12803917-12804916 Capsella rubella
Carub.0003s3030 2.0kb upstream 2.0kb upstream 3442 true scaffold_3: 12804917-12808358 Capsella rubella
Carub.0003s3030 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12806359-12808358 Capsella rubella
Carub.0003s3030 2.0kb downstream 2.0kb downstream 3442 true scaffold_3: 12802917-12806358 Capsella rubella
Carub.0003s3030 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12802917-12804916 Capsella rubella
Carub.0003s3030 5.0kb upstream 5.0kb upstream 6442 true scaffold_3: 12804917-12811358 Capsella rubella
Carub.0003s3030 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12806359-12811358 Capsella rubella
Carub.0003s3030 5.0kb downstream 5.0kb downstream 6442 true scaffold_3: 12799917-12806358 Capsella rubella
Carub.0003s3030 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12799917-12804916 Capsella rubella
Carub.0003s3030 10.0kb upstream 10.0kb upstream 11442 true scaffold_3: 12804917-12816358 Capsella rubella
Carub.0003s3030 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12806359-12816358 Capsella rubella
Carub.0003s3030 10.0kb downstream 10.0kb downstream 11442 true scaffold_3: 12794917-12806358 Capsella rubella
Carub.0003s3030 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12794917-12804916 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337703 5261 Brassicaceae View MSA
123778342 5264 Brassicales-Malvales View MSA
124350692 5266 SBM View MSA
124250754 5268 Malvidae View MSA
124071141 5270 Rosid View MSA
123751721 5271 Pentapetalae View MSA
122796043 5272 Eudicot View MSA
122048360 5273 Angiosperm View MSA
121348011 5274 Embryophyte View MSA
123424193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain