Gene : Carub.0003s3032 C. rubella v1.1
Defline:  (1 of 3) 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Genomic Order:  3032
Name:  ? Carub.0003s3032 Secondary Identifier:  ? PAC:39239911
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6121 Capsella rubella pathologic  
Crubella PWY-841 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3032 0.5kb upstream 0.5kb upstream 2424 true scaffold_3: 12815732-12818155 Capsella rubella
Carub.0003s3032 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12817656-12818155 Capsella rubella
Carub.0003s3032 0.5kb downstream 0.5kb downstream 2424 true scaffold_3: 12815232-12817655 Capsella rubella
Carub.0003s3032 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12815232-12815731 Capsella rubella
Carub.0003s3032 1.0kb upstream 1.0kb upstream 2924 true scaffold_3: 12815732-12818655 Capsella rubella
Carub.0003s3032 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12817656-12818655 Capsella rubella
Carub.0003s3032 1.0kb downstream 1.0kb downstream 2924 true scaffold_3: 12814732-12817655 Capsella rubella
Carub.0003s3032 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12814732-12815731 Capsella rubella
Carub.0003s3032 2.0kb upstream 2.0kb upstream 3924 true scaffold_3: 12815732-12819655 Capsella rubella
Carub.0003s3032 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12817656-12819655 Capsella rubella
Carub.0003s3032 2.0kb downstream 2.0kb downstream 3924 true scaffold_3: 12813732-12817655 Capsella rubella
Carub.0003s3032 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12813732-12815731 Capsella rubella
Carub.0003s3032 5.0kb upstream 5.0kb upstream 6924 true scaffold_3: 12815732-12822655 Capsella rubella
Carub.0003s3032 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12817656-12822655 Capsella rubella
Carub.0003s3032 5.0kb downstream 5.0kb downstream 6924 true scaffold_3: 12810732-12817655 Capsella rubella
Carub.0003s3032 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12810732-12815731 Capsella rubella
Carub.0003s3032 10.0kb upstream 10.0kb upstream 11924 true scaffold_3: 12815732-12827655 Capsella rubella
Carub.0003s3032 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12817656-12827655 Capsella rubella
Carub.0003s3032 10.0kb downstream 10.0kb downstream 11924 true scaffold_3: 12805732-12817655 Capsella rubella
Carub.0003s3032 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12805732-12815731 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365178 5261 Brassicaceae View MSA
123837649 5264 Brassicales-Malvales View MSA
124343225 5266 SBM View MSA
124253609 5268 Malvidae View MSA
124066894 5270 Rosid View MSA
123745700 5271 Pentapetalae View MSA
122790878 5272 Eudicot View MSA
122046645 5273 Angiosperm View MSA
121350725 5274 Embryophyte View MSA
123425714 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain