Gene : Carub.0003s3076 C. rubella v1.1
Defline:  (1 of 2) K18752 - transportin-1 (TNPO1) Genomic Order:  3076
Name:  ? Carub.0003s3076 Secondary Identifier:  ? PAC:39242247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3076 0.5kb upstream 0.5kb upstream 7534 true scaffold_3: 13051146-13058679 Capsella rubella
Carub.0003s3076 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13051146-13051645 Capsella rubella
Carub.0003s3076 0.5kb downstream 0.5kb downstream 7534 true scaffold_3: 13051646-13059179 Capsella rubella
Carub.0003s3076 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13058680-13059179 Capsella rubella
Carub.0003s3076 1.0kb upstream 1.0kb upstream 8034 true scaffold_3: 13050646-13058679 Capsella rubella
Carub.0003s3076 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13050646-13051645 Capsella rubella
Carub.0003s3076 1.0kb downstream 1.0kb downstream 8034 true scaffold_3: 13051646-13059679 Capsella rubella
Carub.0003s3076 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13058680-13059679 Capsella rubella
Carub.0003s3076 2.0kb upstream 2.0kb upstream 9034 true scaffold_3: 13049646-13058679 Capsella rubella
Carub.0003s3076 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13049646-13051645 Capsella rubella
Carub.0003s3076 2.0kb downstream 2.0kb downstream 9034 true scaffold_3: 13051646-13060679 Capsella rubella
Carub.0003s3076 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13058680-13060679 Capsella rubella
Carub.0003s3076 5.0kb upstream 5.0kb upstream 12034 true scaffold_3: 13046646-13058679 Capsella rubella
Carub.0003s3076 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13046646-13051645 Capsella rubella
Carub.0003s3076 5.0kb downstream 5.0kb downstream 12034 true scaffold_3: 13051646-13063679 Capsella rubella
Carub.0003s3076 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13058680-13063679 Capsella rubella
Carub.0003s3076 10.0kb upstream 10.0kb upstream 17034 true scaffold_3: 13041646-13058679 Capsella rubella
Carub.0003s3076 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13041646-13051645 Capsella rubella
Carub.0003s3076 10.0kb downstream 10.0kb downstream 17034 true scaffold_3: 13051646-13068679 Capsella rubella
Carub.0003s3076 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13058680-13068679 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026329 5273 Angiosperm View MSA
122376283 5261 Brassicaceae View MSA
123829737 5264 Brassicales-Malvales View MSA
124344998 5266 SBM View MSA
124237948 5268 Malvidae View MSA
124064274 5270 Rosid View MSA
123739927 5271 Pentapetalae View MSA
122787120 5272 Eudicot View MSA
121344720 5274 Embryophyte View MSA
123426345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain