Gene : Carub.0003s3096 C. rubella v1.1
Defline:  (1 of 367) PF01535 - PPR repeat (PPR) Genomic Order:  3096
Name:  ? Carub.0003s3096 Secondary Identifier:  ? PAC:39242548
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3096 0.5kb upstream 0.5kb upstream 2552 true scaffold_3: 13153946-13156497 Capsella rubella
Carub.0003s3096 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13153946-13154445 Capsella rubella
Carub.0003s3096 0.5kb downstream 0.5kb downstream 2552 true scaffold_3: 13154446-13156997 Capsella rubella
Carub.0003s3096 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13156498-13156997 Capsella rubella
Carub.0003s3096 1.0kb upstream 1.0kb upstream 3052 true scaffold_3: 13153446-13156497 Capsella rubella
Carub.0003s3096 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13153446-13154445 Capsella rubella
Carub.0003s3096 1.0kb downstream 1.0kb downstream 3052 true scaffold_3: 13154446-13157497 Capsella rubella
Carub.0003s3096 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13156498-13157497 Capsella rubella
Carub.0003s3096 2.0kb upstream 2.0kb upstream 4052 true scaffold_3: 13152446-13156497 Capsella rubella
Carub.0003s3096 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13152446-13154445 Capsella rubella
Carub.0003s3096 2.0kb downstream 2.0kb downstream 4052 true scaffold_3: 13154446-13158497 Capsella rubella
Carub.0003s3096 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13156498-13158497 Capsella rubella
Carub.0003s3096 5.0kb upstream 5.0kb upstream 7052 true scaffold_3: 13149446-13156497 Capsella rubella
Carub.0003s3096 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13149446-13154445 Capsella rubella
Carub.0003s3096 5.0kb downstream 5.0kb downstream 7052 true scaffold_3: 13154446-13161497 Capsella rubella
Carub.0003s3096 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13156498-13161497 Capsella rubella
Carub.0003s3096 10.0kb upstream 10.0kb upstream 12052 true scaffold_3: 13144446-13156497 Capsella rubella
Carub.0003s3096 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13144446-13154445 Capsella rubella
Carub.0003s3096 10.0kb downstream 10.0kb downstream 12052 true scaffold_3: 13154446-13166497 Capsella rubella
Carub.0003s3096 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13156498-13166497 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371863 5261 Brassicaceae View MSA
123829746 5264 Brassicales-Malvales View MSA
124344114 5266 SBM View MSA
124240333 5268 Malvidae View MSA
124063898 5270 Rosid View MSA
123736801 5271 Pentapetalae View MSA
122790461 5272 Eudicot View MSA
122047687 5273 Angiosperm View MSA
121347538 5274 Embryophyte View MSA
123380566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain