Gene : Carub.0003s3146 C. rubella v1.1
Defline:  (1 of 3) K00384 - thioredoxin reductase (NADPH) (trxB) Genomic Order:  3146
Name:  ? Carub.0003s3146 Secondary Identifier:  ? PAC:39241699
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3146 0.5kb upstream 0.5kb upstream 2699 true scaffold_3: 13336195-13338893 Capsella rubella
Carub.0003s3146 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13336195-13336694 Capsella rubella
Carub.0003s3146 0.5kb downstream 0.5kb downstream 2699 true scaffold_3: 13336695-13339393 Capsella rubella
Carub.0003s3146 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13338894-13339393 Capsella rubella
Carub.0003s3146 1.0kb upstream 1.0kb upstream 3199 true scaffold_3: 13335695-13338893 Capsella rubella
Carub.0003s3146 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13335695-13336694 Capsella rubella
Carub.0003s3146 1.0kb downstream 1.0kb downstream 3199 true scaffold_3: 13336695-13339893 Capsella rubella
Carub.0003s3146 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13338894-13339893 Capsella rubella
Carub.0003s3146 2.0kb upstream 2.0kb upstream 4199 true scaffold_3: 13334695-13338893 Capsella rubella
Carub.0003s3146 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13334695-13336694 Capsella rubella
Carub.0003s3146 2.0kb downstream 2.0kb downstream 4199 true scaffold_3: 13336695-13340893 Capsella rubella
Carub.0003s3146 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13338894-13340893 Capsella rubella
Carub.0003s3146 5.0kb upstream 5.0kb upstream 7199 true scaffold_3: 13331695-13338893 Capsella rubella
Carub.0003s3146 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13331695-13336694 Capsella rubella
Carub.0003s3146 5.0kb downstream 5.0kb downstream 7199 true scaffold_3: 13336695-13343893 Capsella rubella
Carub.0003s3146 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13338894-13343893 Capsella rubella
Carub.0003s3146 10.0kb upstream 10.0kb upstream 12199 true scaffold_3: 13326695-13338893 Capsella rubella
Carub.0003s3146 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13326695-13336694 Capsella rubella
Carub.0003s3146 10.0kb downstream 10.0kb downstream 12199 true scaffold_3: 13336695-13348893 Capsella rubella
Carub.0003s3146 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13338894-13348893 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365446 5261 Brassicaceae View MSA
123840179 5264 Brassicales-Malvales View MSA
124343686 5266 SBM View MSA
124249529 5268 Malvidae View MSA
124061396 5270 Rosid View MSA
123746891 5271 Pentapetalae View MSA
122793572 5272 Eudicot View MSA
122044945 5273 Angiosperm View MSA
121345859 5274 Embryophyte View MSA
123424818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain