Gene : Carub.0003s3177 C. rubella v1.1
Defline:  (1 of 414) PF13041 - PPR repeat family (PPR_2) Genomic Order:  3177
Name:  ? Carub.0003s3177 Secondary Identifier:  ? PAC:39241547
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3177 0.5kb upstream 0.5kb upstream 2615 true scaffold_3: 13460080-13462694 Capsella rubella
Carub.0003s3177 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13460080-13460579 Capsella rubella
Carub.0003s3177 0.5kb downstream 0.5kb downstream 2615 true scaffold_3: 13460580-13463194 Capsella rubella
Carub.0003s3177 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13462695-13463194 Capsella rubella
Carub.0003s3177 1.0kb upstream 1.0kb upstream 3115 true scaffold_3: 13459580-13462694 Capsella rubella
Carub.0003s3177 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13459580-13460579 Capsella rubella
Carub.0003s3177 1.0kb downstream 1.0kb downstream 3115 true scaffold_3: 13460580-13463694 Capsella rubella
Carub.0003s3177 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13462695-13463694 Capsella rubella
Carub.0003s3177 2.0kb upstream 2.0kb upstream 4115 true scaffold_3: 13458580-13462694 Capsella rubella
Carub.0003s3177 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13458580-13460579 Capsella rubella
Carub.0003s3177 2.0kb downstream 2.0kb downstream 4115 true scaffold_3: 13460580-13464694 Capsella rubella
Carub.0003s3177 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13462695-13464694 Capsella rubella
Carub.0003s3177 5.0kb upstream 5.0kb upstream 7115 true scaffold_3: 13455580-13462694 Capsella rubella
Carub.0003s3177 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13455580-13460579 Capsella rubella
Carub.0003s3177 5.0kb downstream 5.0kb downstream 7115 true scaffold_3: 13460580-13467694 Capsella rubella
Carub.0003s3177 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13462695-13467694 Capsella rubella
Carub.0003s3177 10.0kb upstream 10.0kb upstream 12115 true scaffold_3: 13450580-13462694 Capsella rubella
Carub.0003s3177 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13450580-13460579 Capsella rubella
Carub.0003s3177 10.0kb downstream 10.0kb downstream 12115 true scaffold_3: 13460580-13472694 Capsella rubella
Carub.0003s3177 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13462695-13472694 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362809 5261 Brassicaceae View MSA
123831532 5264 Brassicales-Malvales View MSA
124344404 5266 SBM View MSA
124239282 5268 Malvidae View MSA
124050377 5270 Rosid View MSA
123739053 5271 Pentapetalae View MSA
122787192 5272 Eudicot View MSA
122046913 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain