Gene : Carub.0003s3194 C. rubella v1.1
Defline:  (1 of 3) K18468 - vacuolar protein sorting-associated protein 35 (VPS35) Genomic Order:  3194
Name:  ? Carub.0003s3194 Secondary Identifier:  ? PAC:39239955
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3194 0.5kb upstream 0.5kb upstream 6742 true scaffold_3: 13518414-13525155 Capsella rubella
Carub.0003s3194 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13518414-13518913 Capsella rubella
Carub.0003s3194 0.5kb downstream 0.5kb downstream 6742 true scaffold_3: 13518914-13525655 Capsella rubella
Carub.0003s3194 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13525156-13525655 Capsella rubella
Carub.0003s3194 1.0kb upstream 1.0kb upstream 7242 true scaffold_3: 13517914-13525155 Capsella rubella
Carub.0003s3194 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13517914-13518913 Capsella rubella
Carub.0003s3194 1.0kb downstream 1.0kb downstream 7242 true scaffold_3: 13518914-13526155 Capsella rubella
Carub.0003s3194 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13525156-13526155 Capsella rubella
Carub.0003s3194 2.0kb upstream 2.0kb upstream 8242 true scaffold_3: 13516914-13525155 Capsella rubella
Carub.0003s3194 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13516914-13518913 Capsella rubella
Carub.0003s3194 2.0kb downstream 2.0kb downstream 8242 true scaffold_3: 13518914-13527155 Capsella rubella
Carub.0003s3194 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13525156-13527155 Capsella rubella
Carub.0003s3194 5.0kb upstream 5.0kb upstream 11242 true scaffold_3: 13513914-13525155 Capsella rubella
Carub.0003s3194 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13513914-13518913 Capsella rubella
Carub.0003s3194 5.0kb downstream 5.0kb downstream 11242 true scaffold_3: 13518914-13530155 Capsella rubella
Carub.0003s3194 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13525156-13530155 Capsella rubella
Carub.0003s3194 10.0kb upstream 10.0kb upstream 16242 true scaffold_3: 13508914-13525155 Capsella rubella
Carub.0003s3194 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13508914-13518913 Capsella rubella
Carub.0003s3194 10.0kb downstream 10.0kb downstream 16242 true scaffold_3: 13518914-13535155 Capsella rubella
Carub.0003s3194 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13525156-13535155 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374985 5261 Brassicaceae View MSA
123828358 5264 Brassicales-Malvales View MSA
124346370 5266 SBM View MSA
124242919 5268 Malvidae View MSA
124070989 5270 Rosid View MSA
123744286 5271 Pentapetalae View MSA
122786661 5272 Eudicot View MSA
122044780 5273 Angiosperm View MSA
121345566 5274 Embryophyte View MSA
123426785 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain