Gene : Carub.0003s3222 C. rubella v1.1
Defline:  (1 of 1) PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN Genomic Order:  3222
Name:  ? Carub.0003s3222 Secondary Identifier:  ? PAC:39241606
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3222 0.5kb upstream 0.5kb upstream 4058 true scaffold_3: 13641130-13645187 Capsella rubella
Carub.0003s3222 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13641130-13641629 Capsella rubella
Carub.0003s3222 0.5kb downstream 0.5kb downstream 4058 true scaffold_3: 13641630-13645687 Capsella rubella
Carub.0003s3222 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13645188-13645687 Capsella rubella
Carub.0003s3222 1.0kb upstream 1.0kb upstream 4558 true scaffold_3: 13640630-13645187 Capsella rubella
Carub.0003s3222 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13640630-13641629 Capsella rubella
Carub.0003s3222 1.0kb downstream 1.0kb downstream 4558 true scaffold_3: 13641630-13646187 Capsella rubella
Carub.0003s3222 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13645188-13646187 Capsella rubella
Carub.0003s3222 2.0kb upstream 2.0kb upstream 5558 true scaffold_3: 13639630-13645187 Capsella rubella
Carub.0003s3222 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13639630-13641629 Capsella rubella
Carub.0003s3222 2.0kb downstream 2.0kb downstream 5558 true scaffold_3: 13641630-13647187 Capsella rubella
Carub.0003s3222 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13645188-13647187 Capsella rubella
Carub.0003s3222 5.0kb upstream 5.0kb upstream 8558 true scaffold_3: 13636630-13645187 Capsella rubella
Carub.0003s3222 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13636630-13641629 Capsella rubella
Carub.0003s3222 5.0kb downstream 5.0kb downstream 8558 true scaffold_3: 13641630-13650187 Capsella rubella
Carub.0003s3222 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13645188-13650187 Capsella rubella
Carub.0003s3222 10.0kb upstream 10.0kb upstream 13558 true scaffold_3: 13631630-13645187 Capsella rubella
Carub.0003s3222 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13631630-13641629 Capsella rubella
Carub.0003s3222 10.0kb downstream 10.0kb downstream 13558 true scaffold_3: 13641630-13655187 Capsella rubella
Carub.0003s3222 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13645188-13655187 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365616 5261 Brassicaceae View MSA
123798997 5264 Brassicales-Malvales View MSA
124296565 5266 SBM View MSA
124148678 5268 Malvidae View MSA
123874629 5270 Rosid View MSA
123753023 5271 Pentapetalae View MSA
122797063 5272 Eudicot View MSA
122044287 5273 Angiosperm View MSA
121348598 5274 Embryophyte View MSA
123380932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain