Gene : Carub.0003s3219 C. rubella v1.1
Defline:  (1 of 1) K09578 - peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (PIN1) Genomic Order:  3219
Name:  ? Carub.0003s3219 Secondary Identifier:  ? PAC:39242239
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3219 0.5kb upstream 0.5kb upstream 2039 true scaffold_3: 13630950-13632988 Capsella rubella
Carub.0003s3219 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13630950-13631449 Capsella rubella
Carub.0003s3219 0.5kb downstream 0.5kb downstream 2039 true scaffold_3: 13631450-13633488 Capsella rubella
Carub.0003s3219 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13632989-13633488 Capsella rubella
Carub.0003s3219 1.0kb upstream 1.0kb upstream 2539 true scaffold_3: 13630450-13632988 Capsella rubella
Carub.0003s3219 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13630450-13631449 Capsella rubella
Carub.0003s3219 1.0kb downstream 1.0kb downstream 2539 true scaffold_3: 13631450-13633988 Capsella rubella
Carub.0003s3219 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13632989-13633988 Capsella rubella
Carub.0003s3219 2.0kb upstream 2.0kb upstream 3539 true scaffold_3: 13629450-13632988 Capsella rubella
Carub.0003s3219 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13629450-13631449 Capsella rubella
Carub.0003s3219 2.0kb downstream 2.0kb downstream 3539 true scaffold_3: 13631450-13634988 Capsella rubella
Carub.0003s3219 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13632989-13634988 Capsella rubella
Carub.0003s3219 5.0kb upstream 5.0kb upstream 6539 true scaffold_3: 13626450-13632988 Capsella rubella
Carub.0003s3219 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13626450-13631449 Capsella rubella
Carub.0003s3219 5.0kb downstream 5.0kb downstream 6539 true scaffold_3: 13631450-13637988 Capsella rubella
Carub.0003s3219 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13632989-13637988 Capsella rubella
Carub.0003s3219 10.0kb upstream 10.0kb upstream 11539 true scaffold_3: 13621450-13632988 Capsella rubella
Carub.0003s3219 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13621450-13631449 Capsella rubella
Carub.0003s3219 10.0kb downstream 10.0kb downstream 11539 true scaffold_3: 13631450-13642988 Capsella rubella
Carub.0003s3219 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13632989-13642988 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362383 5261 Brassicaceae View MSA
123835138 5264 Brassicales-Malvales View MSA
124350164 5266 SBM View MSA
124237983 5268 Malvidae View MSA
124061766 5270 Rosid View MSA
123750072 5271 Pentapetalae View MSA
122789506 5272 Eudicot View MSA
122046490 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121345205 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain