Gene : Carub.0003s3241 C. rubella v1.1
Defline:  (1 of 4) PTHR10743:SF2 - PROTEIN RER1B-RELATED Genomic Order:  3241
Name:  ? Carub.0003s3241 Secondary Identifier:  ? PAC:39242003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s3241 0.5kb upstream 0.5kb upstream 2064 true scaffold_3: 13711340-13713403 Capsella rubella
Carub.0003s3241 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13711340-13711839 Capsella rubella
Carub.0003s3241 0.5kb downstream 0.5kb downstream 2064 true scaffold_3: 13711840-13713903 Capsella rubella
Carub.0003s3241 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13713404-13713903 Capsella rubella
Carub.0003s3241 1.0kb upstream 1.0kb upstream 2564 true scaffold_3: 13710840-13713403 Capsella rubella
Carub.0003s3241 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13710840-13711839 Capsella rubella
Carub.0003s3241 1.0kb downstream 1.0kb downstream 2564 true scaffold_3: 13711840-13714403 Capsella rubella
Carub.0003s3241 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13713404-13714403 Capsella rubella
Carub.0003s3241 2.0kb upstream 2.0kb upstream 3564 true scaffold_3: 13709840-13713403 Capsella rubella
Carub.0003s3241 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13709840-13711839 Capsella rubella
Carub.0003s3241 2.0kb downstream 2.0kb downstream 3564 true scaffold_3: 13711840-13715403 Capsella rubella
Carub.0003s3241 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13713404-13715403 Capsella rubella
Carub.0003s3241 5.0kb upstream 5.0kb upstream 6564 true scaffold_3: 13706840-13713403 Capsella rubella
Carub.0003s3241 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13706840-13711839 Capsella rubella
Carub.0003s3241 5.0kb downstream 5.0kb downstream 6564 true scaffold_3: 13711840-13718403 Capsella rubella
Carub.0003s3241 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13713404-13718403 Capsella rubella
Carub.0003s3241 10.0kb upstream 10.0kb upstream 11564 true scaffold_3: 13701840-13713403 Capsella rubella
Carub.0003s3241 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13701840-13711839 Capsella rubella
Carub.0003s3241 10.0kb downstream 10.0kb downstream 11564 true scaffold_3: 13711840-13723403 Capsella rubella
Carub.0003s3241 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13713404-13723403 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364397 5261 Brassicaceae View MSA
123840206 5264 Brassicales-Malvales View MSA
124349349 5266 SBM View MSA
124253453 5268 Malvidae View MSA
124071881 5270 Rosid View MSA
123745031 5271 Pentapetalae View MSA
122794273 5272 Eudicot View MSA
122048346 5273 Angiosperm View MSA
121345453 5274 Embryophyte View MSA
123424083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain