Gene : Carub.0003s2980 C. rubella v1.1
Defline:  (1 of 3) K17925 - sorting nexin-13 (SNX13) Genomic Order:  2980
Name:  ? Carub.0003s2980 Secondary Identifier:  ? PAC:39239926
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2980 0.5kb upstream 0.5kb upstream 6459 true scaffold_3: 12559674-12566132 Capsella rubella
Carub.0003s2980 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12565633-12566132 Capsella rubella
Carub.0003s2980 0.5kb downstream 0.5kb downstream 6459 true scaffold_3: 12559174-12565632 Capsella rubella
Carub.0003s2980 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12559174-12559673 Capsella rubella
Carub.0003s2980 1.0kb upstream 1.0kb upstream 6959 true scaffold_3: 12559674-12566632 Capsella rubella
Carub.0003s2980 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12565633-12566632 Capsella rubella
Carub.0003s2980 1.0kb downstream 1.0kb downstream 6959 true scaffold_3: 12558674-12565632 Capsella rubella
Carub.0003s2980 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12558674-12559673 Capsella rubella
Carub.0003s2980 2.0kb upstream 2.0kb upstream 7959 true scaffold_3: 12559674-12567632 Capsella rubella
Carub.0003s2980 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12565633-12567632 Capsella rubella
Carub.0003s2980 2.0kb downstream 2.0kb downstream 7959 true scaffold_3: 12557674-12565632 Capsella rubella
Carub.0003s2980 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12557674-12559673 Capsella rubella
Carub.0003s2980 5.0kb upstream 5.0kb upstream 10959 true scaffold_3: 12559674-12570632 Capsella rubella
Carub.0003s2980 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12565633-12570632 Capsella rubella
Carub.0003s2980 5.0kb downstream 5.0kb downstream 10959 true scaffold_3: 12554674-12565632 Capsella rubella
Carub.0003s2980 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12554674-12559673 Capsella rubella
Carub.0003s2980 10.0kb upstream 10.0kb upstream 15959 true scaffold_3: 12559674-12575632 Capsella rubella
Carub.0003s2980 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12565633-12575632 Capsella rubella
Carub.0003s2980 10.0kb downstream 10.0kb downstream 15959 true scaffold_3: 12549674-12565632 Capsella rubella
Carub.0003s2980 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12549674-12559673 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335999 5261 Brassicaceae Singleton cluster - no MSA
123842981 5264 Brassicales-Malvales View MSA
124323911 5266 SBM View MSA
124254555 5268 Malvidae View MSA
124063177 5270 Rosid View MSA
123744623 5271 Pentapetalae View MSA
122786474 5272 Eudicot View MSA
122049546 5273 Angiosperm View MSA
121349142 5274 Embryophyte View MSA
123426415 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain