Gene : Carub.0003s2876 C. rubella v1.1
Defline:  (1 of 2) PTHR22765//PTHR22765:SF54 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 3-RELATED Genomic Order:  2876
Name:  ? Carub.0003s2876 Secondary Identifier:  ? PAC:39240090
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2876 0.5kb upstream 0.5kb upstream 4385 true scaffold_3: 12002631-12007015 Capsella rubella
Carub.0003s2876 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12006516-12007015 Capsella rubella
Carub.0003s2876 0.5kb downstream 0.5kb downstream 4385 true scaffold_3: 12002131-12006515 Capsella rubella
Carub.0003s2876 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12002131-12002630 Capsella rubella
Carub.0003s2876 1.0kb upstream 1.0kb upstream 4885 true scaffold_3: 12002631-12007515 Capsella rubella
Carub.0003s2876 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12006516-12007515 Capsella rubella
Carub.0003s2876 1.0kb downstream 1.0kb downstream 4885 true scaffold_3: 12001631-12006515 Capsella rubella
Carub.0003s2876 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12001631-12002630 Capsella rubella
Carub.0003s2876 2.0kb upstream 2.0kb upstream 5885 true scaffold_3: 12002631-12008515 Capsella rubella
Carub.0003s2876 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12006516-12008515 Capsella rubella
Carub.0003s2876 2.0kb downstream 2.0kb downstream 5885 true scaffold_3: 12000631-12006515 Capsella rubella
Carub.0003s2876 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12000631-12002630 Capsella rubella
Carub.0003s2876 5.0kb upstream 5.0kb upstream 8885 true scaffold_3: 12002631-12011515 Capsella rubella
Carub.0003s2876 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12006516-12011515 Capsella rubella
Carub.0003s2876 5.0kb downstream 5.0kb downstream 8885 true scaffold_3: 11997631-12006515 Capsella rubella
Carub.0003s2876 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11997631-12002630 Capsella rubella
Carub.0003s2876 10.0kb upstream 10.0kb upstream 13885 true scaffold_3: 12002631-12016515 Capsella rubella
Carub.0003s2876 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12006516-12016515 Capsella rubella
Carub.0003s2876 10.0kb downstream 10.0kb downstream 13885 true scaffold_3: 11992631-12006515 Capsella rubella
Carub.0003s2876 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11992631-12002630 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338545 5261 Brassicaceae View MSA
123779109 5264 Brassicales-Malvales View MSA
124350729 5266 SBM View MSA
124251078 5268 Malvidae View MSA
124068352 5270 Rosid View MSA
123747014 5271 Pentapetalae View MSA
122793065 5272 Eudicot View MSA
122047431 5273 Angiosperm View MSA
121350422 5274 Embryophyte View MSA
123428728 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain