Gene : Carub.0003s0198 C. rubella v1.1
Defline:  (1 of 1) PTHR11014:SF108 - IAA-AMINO ACID HYDROLASE ILR1 Genomic Order:  198
Name:  ? Carub.0003s0198 Secondary Identifier:  ? PAC:39241642
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0198 0.5kb upstream 0.5kb upstream 3046 true scaffold_3: 637919-640964 Capsella rubella
Carub.0003s0198 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 637919-638418 Capsella rubella
Carub.0003s0198 0.5kb downstream 0.5kb downstream 3046 true scaffold_3: 638419-641464 Capsella rubella
Carub.0003s0198 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 640965-641464 Capsella rubella
Carub.0003s0198 1.0kb upstream 1.0kb upstream 3546 true scaffold_3: 637419-640964 Capsella rubella
Carub.0003s0198 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 637419-638418 Capsella rubella
Carub.0003s0198 1.0kb downstream 1.0kb downstream 3546 true scaffold_3: 638419-641964 Capsella rubella
Carub.0003s0198 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 640965-641964 Capsella rubella
Carub.0003s0198 2.0kb upstream 2.0kb upstream 4546 true scaffold_3: 636419-640964 Capsella rubella
Carub.0003s0198 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 636419-638418 Capsella rubella
Carub.0003s0198 2.0kb downstream 2.0kb downstream 4546 true scaffold_3: 638419-642964 Capsella rubella
Carub.0003s0198 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 640965-642964 Capsella rubella
Carub.0003s0198 5.0kb upstream 5.0kb upstream 7546 true scaffold_3: 633419-640964 Capsella rubella
Carub.0003s0198 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 633419-638418 Capsella rubella
Carub.0003s0198 5.0kb downstream 5.0kb downstream 7546 true scaffold_3: 638419-645964 Capsella rubella
Carub.0003s0198 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 640965-645964 Capsella rubella
Carub.0003s0198 10.0kb upstream 10.0kb upstream 12546 true scaffold_3: 628419-640964 Capsella rubella
Carub.0003s0198 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 628419-638418 Capsella rubella
Carub.0003s0198 10.0kb downstream 10.0kb downstream 12546 true scaffold_3: 638419-650964 Capsella rubella
Carub.0003s0198 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 640965-650964 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371486 5261 Brassicaceae View MSA
123836324 5264 Brassicales-Malvales View MSA
124348984 5266 SBM View MSA
124244461 5268 Malvidae View MSA
124072861 5270 Rosid View MSA
123748311 5271 Pentapetalae View MSA
122791889 5272 Eudicot View MSA
122046884 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain