Gene : Carub.0003s0499 C. rubella v1.1
Defline:  (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Genomic Order:  499
Name:  ? Carub.0003s0499 Secondary Identifier:  ? PAC:39242006
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0499 0.5kb upstream 0.5kb upstream 4731 true scaffold_3: 1680910-1685640 Capsella rubella
Carub.0003s0499 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1680910-1681409 Capsella rubella
Carub.0003s0499 0.5kb downstream 0.5kb downstream 4731 true scaffold_3: 1681410-1686140 Capsella rubella
Carub.0003s0499 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1685641-1686140 Capsella rubella
Carub.0003s0499 1.0kb upstream 1.0kb upstream 5231 true scaffold_3: 1680410-1685640 Capsella rubella
Carub.0003s0499 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1680410-1681409 Capsella rubella
Carub.0003s0499 1.0kb downstream 1.0kb downstream 5231 true scaffold_3: 1681410-1686640 Capsella rubella
Carub.0003s0499 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1685641-1686640 Capsella rubella
Carub.0003s0499 2.0kb upstream 2.0kb upstream 6231 true scaffold_3: 1679410-1685640 Capsella rubella
Carub.0003s0499 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1679410-1681409 Capsella rubella
Carub.0003s0499 2.0kb downstream 2.0kb downstream 6231 true scaffold_3: 1681410-1687640 Capsella rubella
Carub.0003s0499 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1685641-1687640 Capsella rubella
Carub.0003s0499 5.0kb upstream 5.0kb upstream 9231 true scaffold_3: 1676410-1685640 Capsella rubella
Carub.0003s0499 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1676410-1681409 Capsella rubella
Carub.0003s0499 5.0kb downstream 5.0kb downstream 9231 true scaffold_3: 1681410-1690640 Capsella rubella
Carub.0003s0499 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1685641-1690640 Capsella rubella
Carub.0003s0499 10.0kb upstream 10.0kb upstream 14231 true scaffold_3: 1671410-1685640 Capsella rubella
Carub.0003s0499 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1671410-1681409 Capsella rubella
Carub.0003s0499 10.0kb downstream 10.0kb downstream 14231 true scaffold_3: 1681410-1695640 Capsella rubella
Carub.0003s0499 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1685641-1695640 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363486 5261 Brassicaceae View MSA
123839264 5264 Brassicales-Malvales View MSA
124342938 5266 SBM View MSA
124251049 5268 Malvidae View MSA
124064836 5270 Rosid View MSA
123742446 5271 Pentapetalae View MSA
122794667 5272 Eudicot View MSA
122041615 5273 Angiosperm View MSA
121349825 5274 Embryophyte View MSA
123426689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain