Protein Family : PHD-finger family protein, expressed 123426689

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  144

144 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30128.t000339 (1 of 1) KOG2177 - Predicted E3 ubiquitin ligase R. communis v0.1 2724   30128: 1485828-1488551
30138.t000086 (1 of 2) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) R. communis v0.1 2727   30138: 590473-593199
Cucsa.051290 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) C. sativus v1.0 3400   scaffold00557: 464521-467920
Cucsa.113500 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) C. sativus v1.0 3219   scaffold00953: 1616415-1619633
orange1.1g003346m.g (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED C. sinensis v1.1 4291   scaffold00004: 4005598-4009888
orange1.1g005857m.g (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) C. sinensis v1.1 3150   scaffold00030: 545858-549007
AT3G05670 (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED A. thaliana TAIR10 3896   Chr3: 1653264-1657159
Thhalv10020032m.g (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED E. salsugineum v1.0 3905   scaffold_13: 7741889-7745793
Ciclev10000286m.g (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED C. clementina v1.0 3667   scaffold_5: 33846262-33849928
Ciclev10019179m.g (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) C. clementina v1.0 3143   scaffold_3: 8673984-8677126
Lus10013501.g (1 of 75) PF00628 - PHD-finger (PHD) L. usitatissimum v1.0 1776   scaffold230: 467532-469307
Lus10031468.g (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) L. usitatissimum v1.0 2175   scaffold863: 435475-437649
Lus10015213.g (1 of 1) KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component L. usitatissimum v1.0 3335   scaffold866: 555021-558355
Gorai.001G066400 (1 of 4) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) G. raimondii v2.1 3898   Chr01: 6658908-6662805
Gorai.013G206200 (1 of 3) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED G. raimondii v2.1 3649   Chr13: 51691797-51695445
Gorai.013G127600 (1 of 3) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED G. raimondii v2.1 4388   Chr13: 33222504-33226891
Gorai.007G303700 (1 of 3) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED G. raimondii v2.1 4449   Chr07: 51735403-51739851
fgenesh1_pg_2_num_121 (1 of 1) PTHR22880:SF154 - BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2B C. subellipsoidea C-169 v2.0 3729   scaffold_2: 934114-937842
MicpuC2.EuGene.0000160081 (1 of 5) PTHR10615 - HISTONE ACETYLTRANSFERASE M. pusilla CCMP1545 v3.0 2113   scaffold_16: 139502-141614
EuGene.1000010491 (1 of 1) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) M. sp RCC299 v3.0 2178   Chr_10: 1031328-1033505
Thecc1EG014395 (1 of 1) K17586 - PHD and RING finger domain-containing protein 1 (PHRF1) T. cacao v1.1 4080   scaffold_3: 22144458-22148537
Thecc1EG026728 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) T. cacao v1.1 4319   scaffold_5: 39801670-39805988
Migut.D01494 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) M. guttatus v2.0 4270   scaffold_4: 9208307-9212576
Migut.B00983 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) M. guttatus v2.0 4186   scaffold_2: 7853064-7857249
Araha.5514s0004 (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED A. halleri v1.1 4181   Scaffold5514: 25211-29391
Cagra.2108s0002 (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED C. grandiflora v1.1 4217   Scaffold2108: 4257-8473
Glyma.10G149400 (1 of 2) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED G. max Wm82.a2.v1 3274   Chr10: 38469764-38473037
Glyma.17G082300 (1 of 98) PF00628 - PHD-finger (PHD) G. max Wm82.a2.v1 4556   Chr17: 6406245-6410800
Glyma.20G238800 (1 of 2) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED G. max Wm82.a2.v1 4039   Chr20: 47048696-47052734
Brara.E03349 (1 of 2) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED B. rapa FPsc v1.3 3405   A05: 26938020-26941424

144 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30138.m003912 R. communis v0.1 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
30128.m008878 R. communis v0.1 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
Cucsa.051290.1 C. sativus v1.0 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
Cucsa.113500.1 C. sativus v1.0 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
orange1.1g003346m C. sinensis v1.1 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
orange1.1g005857m C. sinensis v1.1 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
AT3G05670.1 A. thaliana TAIR10 123426689 PHD-finger family protein, expressed 1 5275 Viridiplantae
Thhalv10020032m E. salsugineum v1.0 123426689 PHD-finger family protein, expressed 1 5275 Viridiplantae
Ciclev10000286m C. clementina v1.0 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
Ciclev10019179m C. clementina v1.0 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
Lus10015213 L. usitatissimum v1.0 123426689 PHD-finger family protein, expressed 3 5275 Viridiplantae
Lus10031468 L. usitatissimum v1.0 123426689 PHD-finger family protein, expressed 3 5275 Viridiplantae
Lus10013501 L. usitatissimum v1.0 123426689 PHD-finger family protein, expressed 3 5275 Viridiplantae
Gorai.007G303700.1 G. raimondii v2.1 123426689 PHD-finger family protein, expressed 4 5275 Viridiplantae
Gorai.001G066400.1 G. raimondii v2.1 123426689 PHD-finger family protein, expressed 4 5275 Viridiplantae
Gorai.013G206200.1 G. raimondii v2.1 123426689 PHD-finger family protein, expressed 4 5275 Viridiplantae
Gorai.013G127600.1 G. raimondii v2.1 123426689 PHD-finger family protein, expressed 4 5275 Viridiplantae
39509 C. subellipsoidea C-169 v2.0 123426689 PHD-finger family protein, expressed 1 5275 Viridiplantae
53805 M. pusilla CCMP1545 v3.0 123426689 PHD-finger family protein, expressed 1 5275 Viridiplantae
62154 M. sp RCC299 v3.0 123426689 PHD-finger family protein, expressed 1 5275 Viridiplantae
Thecc1EG014395t1 T. cacao v1.1 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
Thecc1EG026728t1 T. cacao v1.1 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
Migut.B00983.1.p M. guttatus v2.0 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
Migut.D01494.1.p M. guttatus v2.0 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae
Araha.5514s0004.1.p A. halleri v1.1 123426689 PHD-finger family protein, expressed 1 5275 Viridiplantae
Cagra.2108s0002.1.p C. grandiflora v1.1 123426689 PHD-finger family protein, expressed 1 5275 Viridiplantae
Glyma.17G082300.1.p G. max Wm82.a2.v1 123426689 PHD-finger family protein, expressed 3 5275 Viridiplantae
Glyma.10G149400.1.p G. max Wm82.a2.v1 123426689 PHD-finger family protein, expressed 3 5275 Viridiplantae
Glyma.20G238800.1.p G. max Wm82.a2.v1 123426689 PHD-finger family protein, expressed 3 5275 Viridiplantae
Brara.C03114.1.p B. rapa FPsc v1.3 123426689 PHD-finger family protein, expressed 2 5275 Viridiplantae