Gene : Brara.E03349 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Genomic Order:  3349
Name:  ? Brara.E03349 Secondary Identifier:  ? PAC:30624633
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03349 0.5kb upstream 0.5kb upstream 3905 true A05: 26938020-26941924 Brassica rapa FPsc
Brara.E03349 0.5kb upstream 0.5kb upstream 500 false A05: 26941425-26941924 Brassica rapa FPsc
Brara.E03349 0.5kb downstream 0.5kb downstream 3905 true A05: 26937520-26941424 Brassica rapa FPsc
Brara.E03349 0.5kb downstream 0.5kb downstream 500 false A05: 26937520-26938019 Brassica rapa FPsc
Brara.E03349 1.0kb upstream 1.0kb upstream 4405 true A05: 26938020-26942424 Brassica rapa FPsc
Brara.E03349 1.0kb upstream 1.0kb upstream 1000 false A05: 26941425-26942424 Brassica rapa FPsc
Brara.E03349 1.0kb downstream 1.0kb downstream 4405 true A05: 26937020-26941424 Brassica rapa FPsc
Brara.E03349 1.0kb downstream 1.0kb downstream 1000 false A05: 26937020-26938019 Brassica rapa FPsc
Brara.E03349 2.0kb upstream 2.0kb upstream 5405 true A05: 26938020-26943424 Brassica rapa FPsc
Brara.E03349 2.0kb upstream 2.0kb upstream 2000 false A05: 26941425-26943424 Brassica rapa FPsc
Brara.E03349 2.0kb downstream 2.0kb downstream 5405 true A05: 26936020-26941424 Brassica rapa FPsc
Brara.E03349 2.0kb downstream 2.0kb downstream 2000 false A05: 26936020-26938019 Brassica rapa FPsc
Brara.E03349 5.0kb upstream 5.0kb upstream 8405 true A05: 26938020-26946424 Brassica rapa FPsc
Brara.E03349 5.0kb upstream 5.0kb upstream 5000 false A05: 26941425-26946424 Brassica rapa FPsc
Brara.E03349 5.0kb downstream 5.0kb downstream 8405 true A05: 26933020-26941424 Brassica rapa FPsc
Brara.E03349 5.0kb downstream 5.0kb downstream 5000 false A05: 26933020-26938019 Brassica rapa FPsc
Brara.E03349 10.0kb upstream 10.0kb upstream 13405 true A05: 26938020-26951424 Brassica rapa FPsc
Brara.E03349 10.0kb upstream 10.0kb upstream 10000 false A05: 26941425-26951424 Brassica rapa FPsc
Brara.E03349 10.0kb downstream 10.0kb downstream 13405 true A05: 26928020-26941424 Brassica rapa FPsc
Brara.E03349 10.0kb downstream 10.0kb downstream 10000 false A05: 26928020-26938019 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349402 5261 Brassicaceae Singleton cluster - no MSA
123788595 5264 Brassicales-Malvales Singleton cluster - no MSA
124286618 5266 SBM Singleton cluster - no MSA
124251049 5268 Malvidae View MSA
124064836 5270 Rosid View MSA
123742446 5271 Pentapetalae View MSA
122794667 5272 Eudicot View MSA
122041615 5273 Angiosperm View MSA
121349825 5274 Embryophyte View MSA
123426689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier