Gene : Glyma.17G082300 G. max Wm82.a2.v1
Defline:  (1 of 98) PF00628 - PHD-finger (PHD) Genomic Order:  823
Name:  ? Glyma.17G082300 Secondary Identifier:  ? PAC:30482250
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G082300 0.5kb upstream 0.5kb upstream 5056   true Chr17: 6406245-6411300 Glycine max
Glyma.17G082300 0.5kb upstream 0.5kb upstream 500   false Chr17: 6410801-6411300 Glycine max
Glyma.17G082300 0.5kb downstream 0.5kb downstream 5056   true Chr17: 6405745-6410800 Glycine max
Glyma.17G082300 0.5kb downstream 0.5kb downstream 500   false Chr17: 6405745-6406244 Glycine max
Glyma.17G082300 1.0kb upstream 1.0kb upstream 5556   true Chr17: 6406245-6411800 Glycine max
Glyma.17G082300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6410801-6411800 Glycine max
Glyma.17G082300 1.0kb downstream 1.0kb downstream 5556   true Chr17: 6405245-6410800 Glycine max
Glyma.17G082300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6405245-6406244 Glycine max
Glyma.17G082300 2.0kb upstream 2.0kb upstream 6556   true Chr17: 6406245-6412800 Glycine max
Glyma.17G082300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6410801-6412800 Glycine max
Glyma.17G082300 2.0kb downstream 2.0kb downstream 6556   true Chr17: 6404245-6410800 Glycine max
Glyma.17G082300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6404245-6406244 Glycine max
Glyma.17G082300 5.0kb upstream 5.0kb upstream 9556   true Chr17: 6406245-6415800 Glycine max
Glyma.17G082300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6410801-6415800 Glycine max
Glyma.17G082300 5.0kb downstream 5.0kb downstream 9556   true Chr17: 6401245-6410800 Glycine max
Glyma.17G082300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6401245-6406244 Glycine max
Glyma.17G082300 10.0kb upstream 10.0kb upstream 14556   true Chr17: 6406245-6420800 Glycine max
Glyma.17G082300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6410801-6420800 Glycine max
Glyma.17G082300 10.0kb downstream 10.0kb downstream 14556   true Chr17: 6396245-6410800 Glycine max
Glyma.17G082300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6396245-6406244 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311160 5265 Fabidae View MSA
124070760 5270 Rosid View MSA
123742590 5271 Pentapetalae View MSA
122794342 5272 Eudicot View MSA
122048494 5273 Angiosperm View MSA
121349825 5274 Embryophyte View MSA
123426689 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.96289 0.0 16.4505    
cufflinks 6.10132 0.0 16.8016    
cufflinks 4.18104 0.0 11.9188    
cufflinks 4.60395 0.0 13.0035    
cufflinks 3.06955 0.0 9.13262    
cufflinks 2.2021 0.0 6.86382   Low
cufflinks 8.62162 0.0 23.2544   High
cufflinks 2.91887 0.0 8.72955    
cufflinks 3.88883 0.0 11.2114    
cufflinks 1.237       Low
cufflinks 1.796        
cufflinks 2.54        
cufflinks 1.559        
cufflinks 2.078        
cufflinks 2.421        
cufflinks 4.427       High
cufflinks 0.869       Low
cufflinks 3.11        
cufflinks 3.679        
cufflinks 5.222       High
cufflinks 1.924        
cufflinks 4.912       High
cufflinks 3.156        
cufflinks 1.731        
cufflinks 4.927       High
cufflinks 1.235       Low

0 Strain