Protein Family : PHD-finger family protein, expressed 122048494

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  48

48 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30138.t000086 (1 of 2) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) R. communis v0.1 2727   30138: 590473-593199
Cucsa.113500 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) C. sativus v1.0 3219   scaffold00953: 1616415-1619633
orange1.1g005857m.g (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) C. sinensis v1.1 3150   scaffold00030: 545858-549007
Ciclev10019179m.g (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) C. clementina v1.0 3143   scaffold_3: 8673984-8677126
Lus10013501.g (1 of 75) PF00628 - PHD-finger (PHD) L. usitatissimum v1.0 1776   scaffold230: 467532-469307
Gorai.001G066400 (1 of 4) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) G. raimondii v2.1 3898   Chr01: 6658908-6662805
Thecc1EG014395 (1 of 1) K17586 - PHD and RING finger domain-containing protein 1 (PHRF1) T. cacao v1.1 4080   scaffold_3: 22144458-22148537
Migut.D01494 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) M. guttatus v2.0 4270   scaffold_4: 9208307-9212576
Glyma.17G082300 (1 of 98) PF00628 - PHD-finger (PHD) G. max Wm82.a2.v1 4556   Chr17: 6406245-6410800
Medtr4g110090 (1 of 61) PF00628 - PHD-finger (PHD) M. truncatula Mt4.0v1 3297   chr4: 45843403-45846699
evm_27.TU.AmTr_v1.0_scaffold00006.160 (1 of 43) PF00628 - PHD-finger A. trichopoda v1.0 2995   AmTr_v1.0_scaffold00006: 6552777-6555771
Traes_7BS_B0F581FF2 (1 of 1) K17586 - PHD and RING finger domain-containing protein 1 (PHRF1) T. aestivum v2.2 2519   ta_iwgsc_7bs_v1_3164416: 899-3417
Traes_7DS_8136F6941 (1 of 128) PF00628 - PHD-finger (PHD) T. aestivum v2.2 3309   ta_iwgsc_7ds_v1_941809: 2095-5403
Eucgr.B00646 (1 of 200) PF13639 - Ring finger domain (zf-RING_2) E. grandis v2.0 3110   Chr02: 6765636-6768745
Prupe.5G210700 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) P. persica v2.1 3537   Pp05: 16750272-16753808
GSMUA_Achr3G10630_001 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) M. acuminata v1 6201   chr3: 7841577-7847777
Manes.06G080200 (1 of 3) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) M. esculenta v6.1 3366   Chromosome06: 19387219-19390584
Seita.4G124300 (1 of 51) PF00628 - PHD-finger (PHD) S. italica v2.2 3073   scaffold_4: 12804323-12807395
Bradi1g43590 (1 of 1) K17586 - PHD and RING finger domain-containing protein 1 (PHRF1) B. distachyon v3.1 5680   Bd1: 41543822-41549501
Aqcoe3G380000 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) A. coerulea v3.1 3078   Chr_03: 39051932-39055009
LOC_Os06g17280 (1 of 1) K17586 - PHD and RING finger domain-containing protein 1 (PHRF1) O. sativa v7.0 3488   Chr6: 10003546-10007033
Zosma93g00980 (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Z. marina v2.2 2354   scaffold_93: 542622-544975
Tp57577_TGAC_v2_gene2027 (1 of 2) PF00628//PF13639 - PHD-finger (PHD) // Ring finger domain (zf-RING_2) T. pratense v2 3656   Tp57577_TGAC_v2_LG5: 3899581-3903236
DCAR_014019 (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED D. carota v2.0 5481   DCARv2_Chr4: 25524881-25530361
Solyc06g069360.2 (1 of 55) PF00628 - PHD-finger (PHD) S. lycopersicum ITAG2.4 6633   SL2.50ch06: 43107226-43113858
AUR62032144 (1 of 1) K17586 - PHD and RING finger domain-containing protein 1 (PHRF1) C. quinoa v1.0 4923   C_Quinoa_Scaffold_1177: 1186208-1191130
AUR62039663 SPCC126.07c: PHD and RING finger domain-containing protein C126.07c C. quinoa v1.0 4323   C_Quinoa_Scaffold_1452: 428323-432645
Phvul.003G181800 (1 of 1) PTHR22880:SF34 - ATP-DEPENDENT CHROMATIN ASSEMBLY FACTOR LARGE SUBUNIT-RELATED P. vulgaris v2.1 6647   Chr03: 40451563-40458209
Zm00008a034060 (1 of 1) K17586 - PHD and RING finger domain-containing protein 1 (PHRF1) Z. mays PH207 v1.1 3200   chr09: 36756551-36759750
PGSC0003DMG400004060 (1 of 1) PTHR10615//PTHR10615:SF104 - HISTONE ACETYLTRANSFERASE // SUBFAMILY NOT NAMED S. tuberosum v4.03 6655   ST4.03ch06: 51123204-51129858

48 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g005857m C. sinensis v1.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Migut.D01494.1.p M. guttatus v2.0 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00006.160 A. trichopoda v1.0 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Traes_7DS_8136F6941.1 T. aestivum v2.2 122048494 PHD-finger family protein, expressed 2 5273 Angiosperm
Traes_7BS_B0F581FF2.1 T. aestivum v2.2 122048494 PHD-finger family protein, expressed 2 5273 Angiosperm
GSMUA_Achr3P10630_001 M. acuminata v1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Bradi1g43590.2.p B. distachyon v3.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Brast07G103800.1.p B. stacei v1.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Aqcoe3G380000.1.p A. coerulea v3.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
LOC_Os06g17280.1 O. sativa v7.0 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Zosma93g00980.1 Z. marina v2.2 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Tp57577_TGAC_v2_mRNA2073 T. pratense v2 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
DCAR_014019 D. carota v2.0 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
AUR62032144-RA C. quinoa v1.0 122048494 PHD-finger family protein, expressed 2 5273 Angiosperm
AUR62039663-RA C. quinoa v1.0 122048494 PHD-finger family protein, expressed 2 5273 Angiosperm
Phvul.003G181800.2.p P. vulgaris v2.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
PGSC0003DMP400007245 S. tuberosum v4.03 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Pavir.4NG146100.1.p P. virgatum v4.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Sobic.010G118000.1.p S. bicolor v3.1.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
HORVU7Hr1G043160.1 H. vulgare r1 122048494 PHD-finger family protein, expressed 2 5273 Angiosperm
HORVU7Hr1G065120.1 H. vulgare r1 122048494 PHD-finger family protein, expressed 2 5273 Angiosperm
Lsat_1_v5_gn_4_112441.1 L. sativa V8 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Ca_13232 C. arietinum v1.0 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Pahal.4G181000.1.p P. hallii v3.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
PhHAL.4G193400.1.p P. hallii HAL v2.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Misin19G125100.1.p M. sinensis v7.1 122048494 PHD-finger family protein, expressed 2 5273 Angiosperm
OsKitaake06g116800.1.p O. sativa Kitaake v3.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
30138.m003912 R. communis v0.1 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Cucsa.113500.1 C. sativus v1.0 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm
Ciclev10019179m C. clementina v1.0 122048494 PHD-finger family protein, expressed 1 5273 Angiosperm