Gene : Medtr4g110090 M. truncatula Mt4.0v1
Defline:  (1 of 61) PF00628 - PHD-finger (PHD) Description:  PHD-finger protein, putative
Genomic Order:  5805 Name:  ? Medtr4g110090
Secondary Identifier:  ? PAC:31115055
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g110090 0.5kb upstream 0.5kb upstream 3797 true chr4: 45843403-45847199 Medicago truncatula
Medtr4g110090 0.5kb upstream 0.5kb upstream 500 false chr4: 45846700-45847199 Medicago truncatula
Medtr4g110090 0.5kb downstream 0.5kb downstream 3797 true chr4: 45842903-45846699 Medicago truncatula
Medtr4g110090 0.5kb downstream 0.5kb downstream 500 false chr4: 45842903-45843402 Medicago truncatula
Medtr4g110090 1.0kb upstream 1.0kb upstream 4297 true chr4: 45843403-45847699 Medicago truncatula
Medtr4g110090 1.0kb upstream 1.0kb upstream 1000 false chr4: 45846700-45847699 Medicago truncatula
Medtr4g110090 1.0kb downstream 1.0kb downstream 4297 true chr4: 45842403-45846699 Medicago truncatula
Medtr4g110090 1.0kb downstream 1.0kb downstream 1000 false chr4: 45842403-45843402 Medicago truncatula
Medtr4g110090 2.0kb upstream 2.0kb upstream 5297 true chr4: 45843403-45848699 Medicago truncatula
Medtr4g110090 2.0kb upstream 2.0kb upstream 2000 false chr4: 45846700-45848699 Medicago truncatula
Medtr4g110090 2.0kb downstream 2.0kb downstream 5297 true chr4: 45841403-45846699 Medicago truncatula
Medtr4g110090 2.0kb downstream 2.0kb downstream 2000 false chr4: 45841403-45843402 Medicago truncatula
Medtr4g110090 5.0kb upstream 5.0kb upstream 8297 true chr4: 45843403-45851699 Medicago truncatula
Medtr4g110090 5.0kb upstream 5.0kb upstream 5000 false chr4: 45846700-45851699 Medicago truncatula
Medtr4g110090 5.0kb downstream 5.0kb downstream 8297 true chr4: 45838403-45846699 Medicago truncatula
Medtr4g110090 5.0kb downstream 5.0kb downstream 5000 false chr4: 45838403-45843402 Medicago truncatula
Medtr4g110090 10.0kb upstream 10.0kb upstream 13297 true chr4: 45843403-45856699 Medicago truncatula
Medtr4g110090 10.0kb upstream 10.0kb upstream 10000 false chr4: 45846700-45856699 Medicago truncatula
Medtr4g110090 10.0kb downstream 10.0kb downstream 13297 true chr4: 45833403-45846699 Medicago truncatula
Medtr4g110090 10.0kb downstream 10.0kb downstream 10000 false chr4: 45833403-45843402 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311160 5265 Fabidae View MSA
124070760 5270 Rosid View MSA
123742590 5271 Pentapetalae View MSA
122794342 5272 Eudicot View MSA
122048494 5273 Angiosperm View MSA
121349825 5274 Embryophyte View MSA
123426689 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.64        
cufflinks 1.394        
cufflinks 2.536       High
cufflinks 1.3        
cufflinks 1.619        
cufflinks 0.957       Low
cufflinks 1.799        
cufflinks 2.286       High
cufflinks 1.669        

0 Strain