Gene : Carub.0003s0113 C. rubella v1.1
Defline:  (1 of 2) PTHR13169//PTHR13169:SF4 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN // MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1-RELATED Genomic Order:  113
Name:  ? Carub.0003s0113 Secondary Identifier:  ? PAC:39239536
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0113 0.5kb upstream 0.5kb upstream 2243 true scaffold_3: 361475-363717 Capsella rubella
Carub.0003s0113 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 363218-363717 Capsella rubella
Carub.0003s0113 0.5kb downstream 0.5kb downstream 2243 true scaffold_3: 360975-363217 Capsella rubella
Carub.0003s0113 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 360975-361474 Capsella rubella
Carub.0003s0113 1.0kb upstream 1.0kb upstream 2743 true scaffold_3: 361475-364217 Capsella rubella
Carub.0003s0113 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 363218-364217 Capsella rubella
Carub.0003s0113 1.0kb downstream 1.0kb downstream 2743 true scaffold_3: 360475-363217 Capsella rubella
Carub.0003s0113 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 360475-361474 Capsella rubella
Carub.0003s0113 2.0kb upstream 2.0kb upstream 3743 true scaffold_3: 361475-365217 Capsella rubella
Carub.0003s0113 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 363218-365217 Capsella rubella
Carub.0003s0113 2.0kb downstream 2.0kb downstream 3743 true scaffold_3: 359475-363217 Capsella rubella
Carub.0003s0113 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 359475-361474 Capsella rubella
Carub.0003s0113 5.0kb upstream 5.0kb upstream 6743 true scaffold_3: 361475-368217 Capsella rubella
Carub.0003s0113 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 363218-368217 Capsella rubella
Carub.0003s0113 5.0kb downstream 5.0kb downstream 6743 true scaffold_3: 356475-363217 Capsella rubella
Carub.0003s0113 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 356475-361474 Capsella rubella
Carub.0003s0113 10.0kb upstream 10.0kb upstream 11743 true scaffold_3: 361475-373217 Capsella rubella
Carub.0003s0113 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 363218-373217 Capsella rubella
Carub.0003s0113 10.0kb downstream 10.0kb downstream 11743 true scaffold_3: 351475-363217 Capsella rubella
Carub.0003s0113 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 351475-361474 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361809 5261 Brassicaceae View MSA
123798252 5264 Brassicales-Malvales View MSA
124295919 5266 SBM View MSA
124254148 5268 Malvidae View MSA
124063015 5270 Rosid View MSA
123741686 5271 Pentapetalae View MSA
122788977 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain