Gene : Carub.0003s0117 C. rubella v1.1
Defline:  (1 of 5) 1.1.1.22 - UDP-glucose 6-dehydrogenase Genomic Order:  117
Name:  ? Carub.0003s0117 Secondary Identifier:  ? PAC:39242498
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-4821 Capsella rubella pathologic  
Crubella PWY-7346 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0117 0.5kb upstream 0.5kb upstream 2783 true scaffold_3: 371444-374226 Capsella rubella
Carub.0003s0117 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 373727-374226 Capsella rubella
Carub.0003s0117 0.5kb downstream 0.5kb downstream 2783 true scaffold_3: 370944-373726 Capsella rubella
Carub.0003s0117 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 370944-371443 Capsella rubella
Carub.0003s0117 1.0kb upstream 1.0kb upstream 3283 true scaffold_3: 371444-374726 Capsella rubella
Carub.0003s0117 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 373727-374726 Capsella rubella
Carub.0003s0117 1.0kb downstream 1.0kb downstream 3283 true scaffold_3: 370444-373726 Capsella rubella
Carub.0003s0117 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 370444-371443 Capsella rubella
Carub.0003s0117 2.0kb upstream 2.0kb upstream 4283 true scaffold_3: 371444-375726 Capsella rubella
Carub.0003s0117 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 373727-375726 Capsella rubella
Carub.0003s0117 2.0kb downstream 2.0kb downstream 4283 true scaffold_3: 369444-373726 Capsella rubella
Carub.0003s0117 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 369444-371443 Capsella rubella
Carub.0003s0117 5.0kb upstream 5.0kb upstream 7283 true scaffold_3: 371444-378726 Capsella rubella
Carub.0003s0117 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 373727-378726 Capsella rubella
Carub.0003s0117 5.0kb downstream 5.0kb downstream 7283 true scaffold_3: 366444-373726 Capsella rubella
Carub.0003s0117 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 366444-371443 Capsella rubella
Carub.0003s0117 10.0kb upstream 10.0kb upstream 12283 true scaffold_3: 371444-383726 Capsella rubella
Carub.0003s0117 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 373727-383726 Capsella rubella
Carub.0003s0117 10.0kb downstream 10.0kb downstream 12283 true scaffold_3: 361444-373726 Capsella rubella
Carub.0003s0117 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 361444-371443 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343351 5261 Brassicaceae View MSA
123783581 5264 Brassicales-Malvales View MSA
124349815 5266 SBM View MSA
124253382 5268 Malvidae View MSA
124072920 5270 Rosid View MSA
123748185 5271 Pentapetalae View MSA
122786809 5272 Eudicot View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain