Protein : Carub.0003s0117.1.p C. rubella v1.1
Secondary Identifier:  PAC:39242498 Organism Name:  Capsella rubella
Length:  480   Name:  Carub.0003s0117.1.p
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SummaryProteinsOther
 

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Proteins

6 Protein Domains

DB identifier Type Name
IPR001732 Domain UDP-glucose/GDP-mannose dehydrogenase, N-terminal
IPR014026 Domain UDP-glucose/GDP-mannose dehydrogenase, dimerisation
IPR014027 Domain UDP-glucose/GDP-mannose dehydrogenase, C-terminal
IPR017476 Family UDP-glucose/GDP-mannose dehydrogenase
IPR016040 Domain NAD(P)-binding domain
IPR008927 Domain 6-phosphogluconate dehydrogenase C-terminal domain-like
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0003s0117.1_CDS 1443   scaffold_3: 371605-373047 Capsella rubella

27 Ontology Annotations

Ontology Term Db Gene/Protein Name
TIGR03026 TIGRFAMs Carub.0003s0117.1.p
1.1.1.22 ENZYME Carub.0003s0117.1.p
G3DSA:1.20.5.100 GENE3D Carub.0003s0117.1.p
IPR014026 InterPro Carub.0003s0117.1.p
IPR014027 InterPro Carub.0003s0117.1.p
IPR001732 InterPro Carub.0003s0117.1.p
IPR008927 InterPro Carub.0003s0117.1.p
GO:0051287 GO Carub.0003s0117.1.p
GO:0055114 GO Carub.0003s0117.1.p
G3DSA:3.40.50.720 GENE3D Carub.0003s0117.1.p
GO:0016616 GO Carub.0003s0117.1.p
PWY-4821 Pathway Carub.0003s0117.1.p
PWY-7346 Pathway Carub.0003s0117.1.p
PTHR11374 PANTHER Carub.0003s0117.1.p
PTHR11374:SF28 PANTHER Carub.0003s0117.1.p
K00012 KEGG Carub.0003s0117.1.p
UGD-RXN MetaCyc Carub.0003s0117.1.p
IPR016040 InterPro Carub.0003s0117.1.p
IPR017476 InterPro Carub.0003s0117.1.p
SSF51735 SSF Carub.0003s0117.1.p
SSF52413 SSF Carub.0003s0117.1.p
SM00984 SMART Carub.0003s0117.1.p
SSF48179 SSF Carub.0003s0117.1.p
PF03721 PFAM Carub.0003s0117.1.p
PIRSF000124 PIRSF Carub.0003s0117.1.p
PF00984 PFAM Carub.0003s0117.1.p
PF03720 PFAM Carub.0003s0117.1.p

2 Pathway Components

Type Key Level Step
      4
      8

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-4821 Capsella rubella pathologic  
Crubella PWY-7346 Capsella rubella pathologic