Gene : Carub.0003s0165 C. rubella v1.1

Defline:  (1 of 1) PTHR10621:SF0 - AT15685P-RELATED Genomic Order:  165
Name:  ? Carub.0003s0165 Secondary Identifier:  ? PAC:39240745

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0165 0.5kb upstream 0.5kb upstream 3685 true scaffold_3: 546741-550425 Capsella rubella
Carub.0003s0165 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 549926-550425 Capsella rubella
Carub.0003s0165 0.5kb downstream 0.5kb downstream 3685 true scaffold_3: 546241-549925 Capsella rubella
Carub.0003s0165 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 546241-546740 Capsella rubella
Carub.0003s0165 1.0kb upstream 1.0kb upstream 4185 true scaffold_3: 546741-550925 Capsella rubella
Carub.0003s0165 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 549926-550925 Capsella rubella
Carub.0003s0165 1.0kb downstream 1.0kb downstream 4185 true scaffold_3: 545741-549925 Capsella rubella
Carub.0003s0165 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 545741-546740 Capsella rubella
Carub.0003s0165 2.0kb upstream 2.0kb upstream 5185 true scaffold_3: 546741-551925 Capsella rubella
Carub.0003s0165 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 549926-551925 Capsella rubella
Carub.0003s0165 2.0kb downstream 2.0kb downstream 5185 true scaffold_3: 544741-549925 Capsella rubella
Carub.0003s0165 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 544741-546740 Capsella rubella
Carub.0003s0165 5.0kb upstream 5.0kb upstream 8185 true scaffold_3: 546741-554925 Capsella rubella
Carub.0003s0165 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 549926-554925 Capsella rubella
Carub.0003s0165 5.0kb downstream 5.0kb downstream 8185 true scaffold_3: 541741-549925 Capsella rubella
Carub.0003s0165 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 541741-546740 Capsella rubella
Carub.0003s0165 10.0kb upstream 10.0kb upstream 13185 true scaffold_3: 546741-559925 Capsella rubella
Carub.0003s0165 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 549926-559925 Capsella rubella
Carub.0003s0165 10.0kb downstream 10.0kb downstream 13185 true scaffold_3: 536741-549925 Capsella rubella
Carub.0003s0165 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 536741-546740 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
122375164 5261 Brassicaceae View MSA
123837452 5264 Brassicales-Malvales View MSA
124347950 5266 SBM View MSA
124244016 5268 Malvidae View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain