Gene : Carub.0003s0613 C. rubella v1.1
Defline:  (1 of 2) PTHR11071//PTHR11071:SF200 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  613
Name:  ? Carub.0003s0613 Secondary Identifier:  ? PAC:39240751
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0613 0.5kb upstream 0.5kb upstream 2339 true scaffold_3: 2119400-2121738 Capsella rubella
Carub.0003s0613 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2119400-2119899 Capsella rubella
Carub.0003s0613 0.5kb downstream 0.5kb downstream 2339 true scaffold_3: 2119900-2122238 Capsella rubella
Carub.0003s0613 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2121739-2122238 Capsella rubella
Carub.0003s0613 1.0kb upstream 1.0kb upstream 2839 true scaffold_3: 2118900-2121738 Capsella rubella
Carub.0003s0613 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2118900-2119899 Capsella rubella
Carub.0003s0613 1.0kb downstream 1.0kb downstream 2839 true scaffold_3: 2119900-2122738 Capsella rubella
Carub.0003s0613 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2121739-2122738 Capsella rubella
Carub.0003s0613 2.0kb upstream 2.0kb upstream 3839 true scaffold_3: 2117900-2121738 Capsella rubella
Carub.0003s0613 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2117900-2119899 Capsella rubella
Carub.0003s0613 2.0kb downstream 2.0kb downstream 3839 true scaffold_3: 2119900-2123738 Capsella rubella
Carub.0003s0613 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2121739-2123738 Capsella rubella
Carub.0003s0613 5.0kb upstream 5.0kb upstream 6839 true scaffold_3: 2114900-2121738 Capsella rubella
Carub.0003s0613 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2114900-2119899 Capsella rubella
Carub.0003s0613 5.0kb downstream 5.0kb downstream 6839 true scaffold_3: 2119900-2126738 Capsella rubella
Carub.0003s0613 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2121739-2126738 Capsella rubella
Carub.0003s0613 10.0kb upstream 10.0kb upstream 11839 true scaffold_3: 2109900-2121738 Capsella rubella
Carub.0003s0613 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2109900-2119899 Capsella rubella
Carub.0003s0613 10.0kb downstream 10.0kb downstream 11839 true scaffold_3: 2119900-2131738 Capsella rubella
Carub.0003s0613 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2121739-2131738 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363799 5261 Brassicaceae View MSA
123841585 5264 Brassicales-Malvales View MSA
124345104 5266 SBM View MSA
124253889 5268 Malvidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain