Gene : Carub.0003s0612 C. rubella v1.1
Defline:  (1 of 1) PTHR13484//PTHR13484:SF0 - FIP1-LIKE 1 PROTEIN // PRE-MRNA 3'-END-PROCESSING FACTOR FIP1 Genomic Order:  612
Name:  ? Carub.0003s0612 Secondary Identifier:  ? PAC:39239689
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0612 0.5kb upstream 0.5kb upstream 4418 true scaffold_3: 2114505-2118922 Capsella rubella
Carub.0003s0612 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2114505-2115004 Capsella rubella
Carub.0003s0612 0.5kb downstream 0.5kb downstream 4418 true scaffold_3: 2115005-2119422 Capsella rubella
Carub.0003s0612 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2118923-2119422 Capsella rubella
Carub.0003s0612 1.0kb upstream 1.0kb upstream 4918 true scaffold_3: 2114005-2118922 Capsella rubella
Carub.0003s0612 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2114005-2115004 Capsella rubella
Carub.0003s0612 1.0kb downstream 1.0kb downstream 4918 true scaffold_3: 2115005-2119922 Capsella rubella
Carub.0003s0612 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2118923-2119922 Capsella rubella
Carub.0003s0612 2.0kb upstream 2.0kb upstream 5918 true scaffold_3: 2113005-2118922 Capsella rubella
Carub.0003s0612 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2113005-2115004 Capsella rubella
Carub.0003s0612 2.0kb downstream 2.0kb downstream 5918 true scaffold_3: 2115005-2120922 Capsella rubella
Carub.0003s0612 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2118923-2120922 Capsella rubella
Carub.0003s0612 5.0kb upstream 5.0kb upstream 8918 true scaffold_3: 2110005-2118922 Capsella rubella
Carub.0003s0612 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2110005-2115004 Capsella rubella
Carub.0003s0612 5.0kb downstream 5.0kb downstream 8918 true scaffold_3: 2115005-2123922 Capsella rubella
Carub.0003s0612 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2118923-2123922 Capsella rubella
Carub.0003s0612 10.0kb upstream 10.0kb upstream 13918 true scaffold_3: 2105005-2118922 Capsella rubella
Carub.0003s0612 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2105005-2115004 Capsella rubella
Carub.0003s0612 10.0kb downstream 10.0kb downstream 13918 true scaffold_3: 2115005-2128922 Capsella rubella
Carub.0003s0612 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2118923-2128922 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371269 5261 Brassicaceae View MSA
123800138 5264 Brassicales-Malvales View MSA
124297586 5266 SBM View MSA
124248306 5268 Malvidae View MSA
124073044 5270 Rosid View MSA
123743134 5271 Pentapetalae View MSA
122794251 5272 Eudicot View MSA
122050325 5273 Angiosperm View MSA
121345578 5274 Embryophyte View MSA
123425422 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain