Gene : Carub.0003s0388 C. rubella v1.1
Defline:  (1 of 2) PTHR22595//PTHR22595:SF62 - CHITINASE-RELATED // HEVEIN-LIKE PREPROPROTEIN Genomic Order:  388
Name:  ? Carub.0003s0388 Secondary Identifier:  ? PAC:39239739
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0388 0.5kb upstream 0.5kb upstream 1050 true scaffold_3: 1284162-1285211 Capsella rubella
Carub.0003s0388 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1284712-1285211 Capsella rubella
Carub.0003s0388 0.5kb downstream 0.5kb downstream 1050 true scaffold_3: 1283662-1284711 Capsella rubella
Carub.0003s0388 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1283662-1284161 Capsella rubella
Carub.0003s0388 1.0kb upstream 1.0kb upstream 1550 true scaffold_3: 1284162-1285711 Capsella rubella
Carub.0003s0388 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1284712-1285711 Capsella rubella
Carub.0003s0388 1.0kb downstream 1.0kb downstream 1550 true scaffold_3: 1283162-1284711 Capsella rubella
Carub.0003s0388 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1283162-1284161 Capsella rubella
Carub.0003s0388 2.0kb upstream 2.0kb upstream 2550 true scaffold_3: 1284162-1286711 Capsella rubella
Carub.0003s0388 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1284712-1286711 Capsella rubella
Carub.0003s0388 2.0kb downstream 2.0kb downstream 2550 true scaffold_3: 1282162-1284711 Capsella rubella
Carub.0003s0388 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1282162-1284161 Capsella rubella
Carub.0003s0388 5.0kb upstream 5.0kb upstream 5550 true scaffold_3: 1284162-1289711 Capsella rubella
Carub.0003s0388 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1284712-1289711 Capsella rubella
Carub.0003s0388 5.0kb downstream 5.0kb downstream 5550 true scaffold_3: 1279162-1284711 Capsella rubella
Carub.0003s0388 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1279162-1284161 Capsella rubella
Carub.0003s0388 10.0kb upstream 10.0kb upstream 10550 true scaffold_3: 1284162-1294711 Capsella rubella
Carub.0003s0388 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1284712-1294711 Capsella rubella
Carub.0003s0388 10.0kb downstream 10.0kb downstream 10550 true scaffold_3: 1274162-1284711 Capsella rubella
Carub.0003s0388 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1274162-1284161 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379782 5261 Brassicaceae View MSA
123831819 5264 Brassicales-Malvales View MSA
124344286 5266 SBM View MSA
124241886 5268 Malvidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain