Gene : Carub.0003s0081 C. rubella v1.1
Defline:  (1 of 6) K11644 - paired amphipathic helix protein Sin3a (SIN3A) Genomic Order:  81
Name:  ? Carub.0003s0081 Secondary Identifier:  ? PAC:39241615
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0081 0.5kb upstream 0.5kb upstream 7984 true scaffold_3: 252783-260766 Capsella rubella
Carub.0003s0081 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 260267-260766 Capsella rubella
Carub.0003s0081 0.5kb downstream 0.5kb downstream 7984 true scaffold_3: 252283-260266 Capsella rubella
Carub.0003s0081 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 252283-252782 Capsella rubella
Carub.0003s0081 1.0kb upstream 1.0kb upstream 8484 true scaffold_3: 252783-261266 Capsella rubella
Carub.0003s0081 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 260267-261266 Capsella rubella
Carub.0003s0081 1.0kb downstream 1.0kb downstream 8484 true scaffold_3: 251783-260266 Capsella rubella
Carub.0003s0081 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 251783-252782 Capsella rubella
Carub.0003s0081 2.0kb upstream 2.0kb upstream 9484 true scaffold_3: 252783-262266 Capsella rubella
Carub.0003s0081 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 260267-262266 Capsella rubella
Carub.0003s0081 2.0kb downstream 2.0kb downstream 9484 true scaffold_3: 250783-260266 Capsella rubella
Carub.0003s0081 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 250783-252782 Capsella rubella
Carub.0003s0081 5.0kb upstream 5.0kb upstream 12484 true scaffold_3: 252783-265266 Capsella rubella
Carub.0003s0081 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 260267-265266 Capsella rubella
Carub.0003s0081 5.0kb downstream 5.0kb downstream 12484 true scaffold_3: 247783-260266 Capsella rubella
Carub.0003s0081 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 247783-252782 Capsella rubella
Carub.0003s0081 10.0kb upstream 10.0kb upstream 17484 true scaffold_3: 252783-270266 Capsella rubella
Carub.0003s0081 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 260267-270266 Capsella rubella
Carub.0003s0081 10.0kb downstream 10.0kb downstream 17484 true scaffold_3: 242783-260266 Capsella rubella
Carub.0003s0081 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 242783-252782 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375094 5261 Brassicaceae View MSA
123839182 5264 Brassicales-Malvales View MSA
124351149 5266 SBM View MSA
124237292 5268 Malvidae View MSA
124072493 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain