Gene : Carub.0003s0063 C. rubella v1.1
Defline:  (1 of 2) PTHR24326:SF136 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54-RELATED Genomic Order:  63
Name:  ? Carub.0003s0063 Secondary Identifier:  ? PAC:39240322
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0063 0.5kb upstream 0.5kb upstream 2151 true scaffold_3: 186768-188918 Capsella rubella
Carub.0003s0063 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 186768-187267 Capsella rubella
Carub.0003s0063 0.5kb downstream 0.5kb downstream 2151 true scaffold_3: 187268-189418 Capsella rubella
Carub.0003s0063 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 188919-189418 Capsella rubella
Carub.0003s0063 1.0kb upstream 1.0kb upstream 2651 true scaffold_3: 186268-188918 Capsella rubella
Carub.0003s0063 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 186268-187267 Capsella rubella
Carub.0003s0063 1.0kb downstream 1.0kb downstream 2651 true scaffold_3: 187268-189918 Capsella rubella
Carub.0003s0063 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 188919-189918 Capsella rubella
Carub.0003s0063 2.0kb upstream 2.0kb upstream 3651 true scaffold_3: 185268-188918 Capsella rubella
Carub.0003s0063 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 185268-187267 Capsella rubella
Carub.0003s0063 2.0kb downstream 2.0kb downstream 3651 true scaffold_3: 187268-190918 Capsella rubella
Carub.0003s0063 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 188919-190918 Capsella rubella
Carub.0003s0063 5.0kb upstream 5.0kb upstream 6651 true scaffold_3: 182268-188918 Capsella rubella
Carub.0003s0063 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 182268-187267 Capsella rubella
Carub.0003s0063 5.0kb downstream 5.0kb downstream 6651 true scaffold_3: 187268-193918 Capsella rubella
Carub.0003s0063 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 188919-193918 Capsella rubella
Carub.0003s0063 10.0kb upstream 10.0kb upstream 11651 true scaffold_3: 177268-188918 Capsella rubella
Carub.0003s0063 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 177268-187267 Capsella rubella
Carub.0003s0063 10.0kb downstream 10.0kb downstream 11651 true scaffold_3: 187268-198918 Capsella rubella
Carub.0003s0063 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 188919-198918 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379134 5261 Brassicaceae View MSA
123841004 5264 Brassicales-Malvales View MSA
124347057 5266 SBM View MSA
124248110 5268 Malvidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain