Gene : Carub.0003s0003 C. rubella v1.1
Defline:  (1 of 1) PTHR14025//PTHR14025:SF21 - FAMILY NOT NAMED // DEAD/DEAH BOX HELICASE-RELATED Genomic Order:  3
Name:  ? Carub.0003s0003 Secondary Identifier:  ? PAC:39239338
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0003 0.5kb upstream 0.5kb upstream 4907 true scaffold_3: 7008-11914 Capsella rubella
Carub.0003s0003 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11415-11914 Capsella rubella
Carub.0003s0003 0.5kb downstream 0.5kb downstream 4907 true scaffold_3: 6508-11414 Capsella rubella
Carub.0003s0003 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6508-7007 Capsella rubella
Carub.0003s0003 1.0kb upstream 1.0kb upstream 5407 true scaffold_3: 7008-12414 Capsella rubella
Carub.0003s0003 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11415-12414 Capsella rubella
Carub.0003s0003 1.0kb downstream 1.0kb downstream 5407 true scaffold_3: 6008-11414 Capsella rubella
Carub.0003s0003 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6008-7007 Capsella rubella
Carub.0003s0003 2.0kb upstream 2.0kb upstream 6407 true scaffold_3: 7008-13414 Capsella rubella
Carub.0003s0003 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11415-13414 Capsella rubella
Carub.0003s0003 2.0kb downstream 2.0kb downstream 6407 true scaffold_3: 5008-11414 Capsella rubella
Carub.0003s0003 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5008-7007 Capsella rubella
Carub.0003s0003 5.0kb upstream 5.0kb upstream 9407 true scaffold_3: 7008-16414 Capsella rubella
Carub.0003s0003 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11415-16414 Capsella rubella
Carub.0003s0003 5.0kb downstream 5.0kb downstream 9407 true scaffold_3: 2008-11414 Capsella rubella
Carub.0003s0003 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2008-7007 Capsella rubella
Carub.0003s0003 10.0kb upstream 10.0kb upstream 14407 true scaffold_3: 7008-21414 Capsella rubella
Carub.0003s0003 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11415-21414 Capsella rubella
Carub.0003s0003 10.0kb downstream 10.0kb downstream 11414 true scaffold_3: 1-11414 Capsella rubella
Carub.0003s0003 10.0kb downstream 10.0kb downstream 7007 false scaffold_3: 1-7007 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365664 5261 Brassicaceae View MSA
123835619 5264 Brassicales-Malvales View MSA
124345493 5266 SBM View MSA
124240257 5268 Malvidae View MSA
124064201 5270 Rosid View MSA
123751738 5271 Pentapetalae View MSA
122788297 5272 Eudicot View MSA
122045154 5273 Angiosperm View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain