Gene : Carub.0003s1492 C. rubella v1.1
Defline:  (1 of 2) PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Genomic Order:  1492
Name:  ? Carub.0003s1492 Secondary Identifier:  ? PAC:39239902
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1492 0.5kb upstream 0.5kb upstream 1132 true scaffold_3: 5251747-5252878 Capsella rubella
Carub.0003s1492 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5252379-5252878 Capsella rubella
Carub.0003s1492 0.5kb downstream 0.5kb downstream 1132 true scaffold_3: 5251247-5252378 Capsella rubella
Carub.0003s1492 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5251247-5251746 Capsella rubella
Carub.0003s1492 1.0kb upstream 1.0kb upstream 1632 true scaffold_3: 5251747-5253378 Capsella rubella
Carub.0003s1492 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5252379-5253378 Capsella rubella
Carub.0003s1492 1.0kb downstream 1.0kb downstream 1632 true scaffold_3: 5250747-5252378 Capsella rubella
Carub.0003s1492 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5250747-5251746 Capsella rubella
Carub.0003s1492 2.0kb upstream 2.0kb upstream 2632 true scaffold_3: 5251747-5254378 Capsella rubella
Carub.0003s1492 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5252379-5254378 Capsella rubella
Carub.0003s1492 2.0kb downstream 2.0kb downstream 2632 true scaffold_3: 5249747-5252378 Capsella rubella
Carub.0003s1492 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5249747-5251746 Capsella rubella
Carub.0003s1492 5.0kb upstream 5.0kb upstream 5632 true scaffold_3: 5251747-5257378 Capsella rubella
Carub.0003s1492 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5252379-5257378 Capsella rubella
Carub.0003s1492 5.0kb downstream 5.0kb downstream 5632 true scaffold_3: 5246747-5252378 Capsella rubella
Carub.0003s1492 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5246747-5251746 Capsella rubella
Carub.0003s1492 10.0kb upstream 10.0kb upstream 10632 true scaffold_3: 5251747-5262378 Capsella rubella
Carub.0003s1492 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5252379-5262378 Capsella rubella
Carub.0003s1492 10.0kb downstream 10.0kb downstream 10632 true scaffold_3: 5241747-5252378 Capsella rubella
Carub.0003s1492 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5241747-5251746 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369079 5261 Brassicaceae View MSA
123838815 5264 Brassicales-Malvales View MSA
124347002 5266 SBM View MSA
124245609 5268 Malvidae View MSA
124068768 5270 Rosid View MSA
123745338 5271 Pentapetalae View MSA
122797834 5272 Eudicot View MSA
122050798 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351345 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain