Gene : Carub.0003s1516 C. rubella v1.1
Defline:  (1 of 1) PTHR22870:SF209 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  1516
Name:  ? Carub.0003s1516 Secondary Identifier:  ? PAC:39242436
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1516 0.5kb upstream 0.5kb upstream 3630 true scaffold_3: 5324023-5327652 Capsella rubella
Carub.0003s1516 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5324023-5324522 Capsella rubella
Carub.0003s1516 0.5kb downstream 0.5kb downstream 3630 true scaffold_3: 5324523-5328152 Capsella rubella
Carub.0003s1516 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5327653-5328152 Capsella rubella
Carub.0003s1516 1.0kb upstream 1.0kb upstream 4130 true scaffold_3: 5323523-5327652 Capsella rubella
Carub.0003s1516 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5323523-5324522 Capsella rubella
Carub.0003s1516 1.0kb downstream 1.0kb downstream 4130 true scaffold_3: 5324523-5328652 Capsella rubella
Carub.0003s1516 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5327653-5328652 Capsella rubella
Carub.0003s1516 2.0kb upstream 2.0kb upstream 5130 true scaffold_3: 5322523-5327652 Capsella rubella
Carub.0003s1516 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5322523-5324522 Capsella rubella
Carub.0003s1516 2.0kb downstream 2.0kb downstream 5130 true scaffold_3: 5324523-5329652 Capsella rubella
Carub.0003s1516 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5327653-5329652 Capsella rubella
Carub.0003s1516 5.0kb upstream 5.0kb upstream 8130 true scaffold_3: 5319523-5327652 Capsella rubella
Carub.0003s1516 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5319523-5324522 Capsella rubella
Carub.0003s1516 5.0kb downstream 5.0kb downstream 8130 true scaffold_3: 5324523-5332652 Capsella rubella
Carub.0003s1516 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5327653-5332652 Capsella rubella
Carub.0003s1516 10.0kb upstream 10.0kb upstream 13130 true scaffold_3: 5314523-5327652 Capsella rubella
Carub.0003s1516 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5314523-5324522 Capsella rubella
Carub.0003s1516 10.0kb downstream 10.0kb downstream 13130 true scaffold_3: 5324523-5337652 Capsella rubella
Carub.0003s1516 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5327653-5337652 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041443 5273 Angiosperm View MSA
122364693 5261 Brassicaceae View MSA
123832629 5264 Brassicales-Malvales View MSA
124338213 5266 SBM View MSA
124240020 5268 Malvidae View MSA
124063197 5270 Rosid View MSA
123736907 5271 Pentapetalae View MSA
122790897 5272 Eudicot View MSA
121345963 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain