Gene : Carub.0003s1565 C. rubella v1.1
Genomic Order:  1565 Name:  ? Carub.0003s1565
Secondary Identifier:  ? PAC:39240554
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1565 0.5kb upstream 0.5kb upstream 1505 true scaffold_3: 5516905-5518409 Capsella rubella
Carub.0003s1565 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5516905-5517404 Capsella rubella
Carub.0003s1565 0.5kb downstream 0.5kb downstream 1505 true scaffold_3: 5517405-5518909 Capsella rubella
Carub.0003s1565 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5518410-5518909 Capsella rubella
Carub.0003s1565 1.0kb upstream 1.0kb upstream 2005 true scaffold_3: 5516405-5518409 Capsella rubella
Carub.0003s1565 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5516405-5517404 Capsella rubella
Carub.0003s1565 1.0kb downstream 1.0kb downstream 2005 true scaffold_3: 5517405-5519409 Capsella rubella
Carub.0003s1565 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5518410-5519409 Capsella rubella
Carub.0003s1565 2.0kb upstream 2.0kb upstream 3005 true scaffold_3: 5515405-5518409 Capsella rubella
Carub.0003s1565 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5515405-5517404 Capsella rubella
Carub.0003s1565 2.0kb downstream 2.0kb downstream 3005 true scaffold_3: 5517405-5520409 Capsella rubella
Carub.0003s1565 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5518410-5520409 Capsella rubella
Carub.0003s1565 5.0kb upstream 5.0kb upstream 6005 true scaffold_3: 5512405-5518409 Capsella rubella
Carub.0003s1565 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5512405-5517404 Capsella rubella
Carub.0003s1565 5.0kb downstream 5.0kb downstream 6005 true scaffold_3: 5517405-5523409 Capsella rubella
Carub.0003s1565 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5518410-5523409 Capsella rubella
Carub.0003s1565 10.0kb upstream 10.0kb upstream 11005 true scaffold_3: 5507405-5518409 Capsella rubella
Carub.0003s1565 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5507405-5517404 Capsella rubella
Carub.0003s1565 10.0kb downstream 10.0kb downstream 11005 true scaffold_3: 5517405-5528409 Capsella rubella
Carub.0003s1565 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5518410-5528409 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512078 5273 Angiosperm View MSA
122380326 5261 Brassicaceae View MSA
123802656 5264 Brassicales-Malvales View MSA
124299834 5266 SBM View MSA
124151148 5268 Malvidae View MSA
123876647 5270 Rosid View MSA
123460293 5271 Pentapetalae View MSA
122495670 5272 Eudicot View MSA
120785104 5274 Embryophyte View MSA
122826977 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain