Gene : Carub.0003s1572 C. rubella v1.1
Defline:  (1 of 1) PTHR11814//PTHR11814:SF85 - SULFATE TRANSPORTER // SULFATE TRANSPORTER 3.4-RELATED Genomic Order:  1572
Name:  ? Carub.0003s1572 Secondary Identifier:  ? PAC:39239468
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1572 0.5kb upstream 0.5kb upstream 5055 true scaffold_3: 5555214-5560268 Capsella rubella
Carub.0003s1572 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5555214-5555713 Capsella rubella
Carub.0003s1572 0.5kb downstream 0.5kb downstream 5055 true scaffold_3: 5555714-5560768 Capsella rubella
Carub.0003s1572 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5560269-5560768 Capsella rubella
Carub.0003s1572 1.0kb upstream 1.0kb upstream 5555 true scaffold_3: 5554714-5560268 Capsella rubella
Carub.0003s1572 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5554714-5555713 Capsella rubella
Carub.0003s1572 1.0kb downstream 1.0kb downstream 5555 true scaffold_3: 5555714-5561268 Capsella rubella
Carub.0003s1572 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5560269-5561268 Capsella rubella
Carub.0003s1572 2.0kb upstream 2.0kb upstream 6555 true scaffold_3: 5553714-5560268 Capsella rubella
Carub.0003s1572 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5553714-5555713 Capsella rubella
Carub.0003s1572 2.0kb downstream 2.0kb downstream 6555 true scaffold_3: 5555714-5562268 Capsella rubella
Carub.0003s1572 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5560269-5562268 Capsella rubella
Carub.0003s1572 5.0kb upstream 5.0kb upstream 9555 true scaffold_3: 5550714-5560268 Capsella rubella
Carub.0003s1572 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5550714-5555713 Capsella rubella
Carub.0003s1572 5.0kb downstream 5.0kb downstream 9555 true scaffold_3: 5555714-5565268 Capsella rubella
Carub.0003s1572 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5560269-5565268 Capsella rubella
Carub.0003s1572 10.0kb upstream 10.0kb upstream 14555 true scaffold_3: 5545714-5560268 Capsella rubella
Carub.0003s1572 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5545714-5555713 Capsella rubella
Carub.0003s1572 10.0kb downstream 10.0kb downstream 14555 true scaffold_3: 5555714-5570268 Capsella rubella
Carub.0003s1572 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5560269-5570268 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378380 5261 Brassicaceae View MSA
123838736 5264 Brassicales-Malvales View MSA
124349947 5266 SBM View MSA
124242160 5268 Malvidae View MSA
124063361 5270 Rosid View MSA
123747713 5271 Pentapetalae View MSA
122786090 5272 Eudicot View MSA
122046923 5273 Angiosperm View MSA
121310673 5274 Embryophyte View MSA
123348099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain