Gene : Carub.0003s1577 C. rubella v1.1

Defline:  (1 of 2) KOG4766 - Uncharacterized conserved protein Genomic Order:  1577
Name:  ? Carub.0003s1577 Secondary Identifier:  ? PAC:39240997

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1577 0.5kb upstream 0.5kb upstream 1377 true scaffold_3: 5571797-5573173 Capsella rubella
Carub.0003s1577 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5571797-5572296 Capsella rubella
Carub.0003s1577 0.5kb downstream 0.5kb downstream 1377 true scaffold_3: 5572297-5573673 Capsella rubella
Carub.0003s1577 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5573174-5573673 Capsella rubella
Carub.0003s1577 1.0kb upstream 1.0kb upstream 1877 true scaffold_3: 5571297-5573173 Capsella rubella
Carub.0003s1577 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5571297-5572296 Capsella rubella
Carub.0003s1577 1.0kb downstream 1.0kb downstream 1877 true scaffold_3: 5572297-5574173 Capsella rubella
Carub.0003s1577 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5573174-5574173 Capsella rubella
Carub.0003s1577 2.0kb upstream 2.0kb upstream 2877 true scaffold_3: 5570297-5573173 Capsella rubella
Carub.0003s1577 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5570297-5572296 Capsella rubella
Carub.0003s1577 2.0kb downstream 2.0kb downstream 2877 true scaffold_3: 5572297-5575173 Capsella rubella
Carub.0003s1577 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5573174-5575173 Capsella rubella
Carub.0003s1577 5.0kb upstream 5.0kb upstream 5877 true scaffold_3: 5567297-5573173 Capsella rubella
Carub.0003s1577 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5567297-5572296 Capsella rubella
Carub.0003s1577 5.0kb downstream 5.0kb downstream 5877 true scaffold_3: 5572297-5578173 Capsella rubella
Carub.0003s1577 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5573174-5578173 Capsella rubella
Carub.0003s1577 10.0kb upstream 10.0kb upstream 10877 true scaffold_3: 5562297-5573173 Capsella rubella
Carub.0003s1577 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5562297-5572296 Capsella rubella
Carub.0003s1577 10.0kb downstream 10.0kb downstream 10877 true scaffold_3: 5572297-5583173 Capsella rubella
Carub.0003s1577 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5573174-5583173 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510608 5273 Angiosperm View MSA
122366032 5261 Brassicaceae View MSA
123799091 5264 Brassicales-Malvales View MSA
124296646 5266 SBM View MSA
124148737 5268 Malvidae View MSA
123874676 5270 Rosid View MSA
123458612 5271 Pentapetalae View MSA
122494014 5272 Eudicot View MSA
120783700 5274 Embryophyte View MSA
122825678 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain