Gene : Carub.0003s1805 C. rubella v1.1
Defline:  (1 of 63) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  1805
Name:  ? Carub.0003s1805 Secondary Identifier:  ? PAC:39239335
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1805 0.5kb upstream 0.5kb upstream 794 true scaffold_3: 6395821-6396614 Capsella rubella
Carub.0003s1805 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6395821-6396320 Capsella rubella
Carub.0003s1805 0.5kb downstream 0.5kb downstream 794 true scaffold_3: 6396321-6397114 Capsella rubella
Carub.0003s1805 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6396615-6397114 Capsella rubella
Carub.0003s1805 1.0kb upstream 1.0kb upstream 1294 true scaffold_3: 6395321-6396614 Capsella rubella
Carub.0003s1805 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6395321-6396320 Capsella rubella
Carub.0003s1805 1.0kb downstream 1.0kb downstream 1294 true scaffold_3: 6396321-6397614 Capsella rubella
Carub.0003s1805 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6396615-6397614 Capsella rubella
Carub.0003s1805 2.0kb upstream 2.0kb upstream 2294 true scaffold_3: 6394321-6396614 Capsella rubella
Carub.0003s1805 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6394321-6396320 Capsella rubella
Carub.0003s1805 2.0kb downstream 2.0kb downstream 2294 true scaffold_3: 6396321-6398614 Capsella rubella
Carub.0003s1805 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6396615-6398614 Capsella rubella
Carub.0003s1805 5.0kb upstream 5.0kb upstream 5294 true scaffold_3: 6391321-6396614 Capsella rubella
Carub.0003s1805 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6391321-6396320 Capsella rubella
Carub.0003s1805 5.0kb downstream 5.0kb downstream 5294 true scaffold_3: 6396321-6401614 Capsella rubella
Carub.0003s1805 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6396615-6401614 Capsella rubella
Carub.0003s1805 10.0kb upstream 10.0kb upstream 10294 true scaffold_3: 6386321-6396614 Capsella rubella
Carub.0003s1805 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6386321-6396320 Capsella rubella
Carub.0003s1805 10.0kb downstream 10.0kb downstream 10294 true scaffold_3: 6396321-6406614 Capsella rubella
Carub.0003s1805 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6396615-6406614 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370017 5261 Brassicaceae View MSA
123839110 5264 Brassicales-Malvales View MSA
124350996 5266 SBM View MSA
124250916 5268 Malvidae View MSA
124071320 5270 Rosid View MSA
123749514 5271 Pentapetalae View MSA
122786269 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain