Gene : Carub.0003s1321 C. rubella v1.1
Defline:  (1 of 3) PTHR27001//PTHR27001:SF152 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  1321
Name:  ? Carub.0003s1321 Secondary Identifier:  ? PAC:39240273
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1321 0.5kb upstream 0.5kb upstream 5157 true scaffold_3: 4578237-4583393 Capsella rubella
Carub.0003s1321 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4578237-4578736 Capsella rubella
Carub.0003s1321 0.5kb downstream 0.5kb downstream 5157 true scaffold_3: 4578737-4583893 Capsella rubella
Carub.0003s1321 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4583394-4583893 Capsella rubella
Carub.0003s1321 1.0kb upstream 1.0kb upstream 5657 true scaffold_3: 4577737-4583393 Capsella rubella
Carub.0003s1321 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4577737-4578736 Capsella rubella
Carub.0003s1321 1.0kb downstream 1.0kb downstream 5657 true scaffold_3: 4578737-4584393 Capsella rubella
Carub.0003s1321 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4583394-4584393 Capsella rubella
Carub.0003s1321 2.0kb upstream 2.0kb upstream 6657 true scaffold_3: 4576737-4583393 Capsella rubella
Carub.0003s1321 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4576737-4578736 Capsella rubella
Carub.0003s1321 2.0kb downstream 2.0kb downstream 6657 true scaffold_3: 4578737-4585393 Capsella rubella
Carub.0003s1321 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4583394-4585393 Capsella rubella
Carub.0003s1321 5.0kb upstream 5.0kb upstream 9657 true scaffold_3: 4573737-4583393 Capsella rubella
Carub.0003s1321 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4573737-4578736 Capsella rubella
Carub.0003s1321 5.0kb downstream 5.0kb downstream 9657 true scaffold_3: 4578737-4588393 Capsella rubella
Carub.0003s1321 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4583394-4588393 Capsella rubella
Carub.0003s1321 10.0kb upstream 10.0kb upstream 14657 true scaffold_3: 4568737-4583393 Capsella rubella
Carub.0003s1321 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4568737-4578736 Capsella rubella
Carub.0003s1321 10.0kb downstream 10.0kb downstream 14657 true scaffold_3: 4578737-4593393 Capsella rubella
Carub.0003s1321 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4583394-4593393 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374162 5261 Brassicaceae View MSA
123827408 5264 Brassicales-Malvales View MSA
124338903 5266 SBM View MSA
124237356 5268 Malvidae View MSA
124066375 5270 Rosid View MSA
123738565 5271 Pentapetalae View MSA
122788767 5272 Eudicot View MSA
122047607 5273 Angiosperm View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain