Gene : Carub.0003s1327 C. rubella v1.1
Defline:  (1 of 3) PTHR23421//PTHR23421:SF74 - BETA-GALACTOSIDASE RELATED // BETA-GALACTOSIDASE 1 Genomic Order:  1327
Name:  ? Carub.0003s1327 Secondary Identifier:  ? PAC:39240291
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1327 0.5kb upstream 0.5kb upstream 5869 true scaffold_3: 4603920-4609788 Capsella rubella
Carub.0003s1327 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4603920-4604419 Capsella rubella
Carub.0003s1327 0.5kb downstream 0.5kb downstream 5869 true scaffold_3: 4604420-4610288 Capsella rubella
Carub.0003s1327 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4609789-4610288 Capsella rubella
Carub.0003s1327 1.0kb upstream 1.0kb upstream 6369 true scaffold_3: 4603420-4609788 Capsella rubella
Carub.0003s1327 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4603420-4604419 Capsella rubella
Carub.0003s1327 1.0kb downstream 1.0kb downstream 6369 true scaffold_3: 4604420-4610788 Capsella rubella
Carub.0003s1327 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4609789-4610788 Capsella rubella
Carub.0003s1327 2.0kb upstream 2.0kb upstream 7369 true scaffold_3: 4602420-4609788 Capsella rubella
Carub.0003s1327 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4602420-4604419 Capsella rubella
Carub.0003s1327 2.0kb downstream 2.0kb downstream 7369 true scaffold_3: 4604420-4611788 Capsella rubella
Carub.0003s1327 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4609789-4611788 Capsella rubella
Carub.0003s1327 5.0kb upstream 5.0kb upstream 10369 true scaffold_3: 4599420-4609788 Capsella rubella
Carub.0003s1327 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4599420-4604419 Capsella rubella
Carub.0003s1327 5.0kb downstream 5.0kb downstream 10369 true scaffold_3: 4604420-4614788 Capsella rubella
Carub.0003s1327 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4609789-4614788 Capsella rubella
Carub.0003s1327 10.0kb upstream 10.0kb upstream 15369 true scaffold_3: 4594420-4609788 Capsella rubella
Carub.0003s1327 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4594420-4604419 Capsella rubella
Carub.0003s1327 10.0kb downstream 10.0kb downstream 15369 true scaffold_3: 4604420-4619788 Capsella rubella
Carub.0003s1327 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4609789-4619788 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375613 5261 Brassicaceae View MSA
123835342 5264 Brassicales-Malvales View MSA
124342662 5266 SBM View MSA
124244205 5268 Malvidae View MSA
124074267 5270 Rosid View MSA
123753100 5271 Pentapetalae View MSA
122794326 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain