Gene : Carub.0003s1378 C. rubella v1.1
Defline:  (1 of 3) PTHR31307//PTHR31307:SF4 - FAMILY NOT NAMED // 6B-INTERACTING PROTEIN 1-LIKE 1-RELATED Genomic Order:  1378
Name:  ? Carub.0003s1378 Secondary Identifier:  ? PAC:39240004
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1378 0.5kb upstream 0.5kb upstream 1868 true scaffold_3: 4817573-4819440 Capsella rubella
Carub.0003s1378 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4818941-4819440 Capsella rubella
Carub.0003s1378 0.5kb downstream 0.5kb downstream 1868 true scaffold_3: 4817073-4818940 Capsella rubella
Carub.0003s1378 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4817073-4817572 Capsella rubella
Carub.0003s1378 1.0kb upstream 1.0kb upstream 2368 true scaffold_3: 4817573-4819940 Capsella rubella
Carub.0003s1378 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4818941-4819940 Capsella rubella
Carub.0003s1378 1.0kb downstream 1.0kb downstream 2368 true scaffold_3: 4816573-4818940 Capsella rubella
Carub.0003s1378 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4816573-4817572 Capsella rubella
Carub.0003s1378 2.0kb upstream 2.0kb upstream 3368 true scaffold_3: 4817573-4820940 Capsella rubella
Carub.0003s1378 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4818941-4820940 Capsella rubella
Carub.0003s1378 2.0kb downstream 2.0kb downstream 3368 true scaffold_3: 4815573-4818940 Capsella rubella
Carub.0003s1378 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4815573-4817572 Capsella rubella
Carub.0003s1378 5.0kb upstream 5.0kb upstream 6368 true scaffold_3: 4817573-4823940 Capsella rubella
Carub.0003s1378 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4818941-4823940 Capsella rubella
Carub.0003s1378 5.0kb downstream 5.0kb downstream 6368 true scaffold_3: 4812573-4818940 Capsella rubella
Carub.0003s1378 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4812573-4817572 Capsella rubella
Carub.0003s1378 10.0kb upstream 10.0kb upstream 11368 true scaffold_3: 4817573-4828940 Capsella rubella
Carub.0003s1378 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4818941-4828940 Capsella rubella
Carub.0003s1378 10.0kb downstream 10.0kb downstream 11368 true scaffold_3: 4807573-4818940 Capsella rubella
Carub.0003s1378 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4807573-4817572 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375463 5261 Brassicaceae View MSA
123800959 5264 Brassicales-Malvales View MSA
124298311 5266 SBM View MSA
124244795 5268 Malvidae View MSA
124067837 5270 Rosid View MSA
123743560 5271 Pentapetalae View MSA
122785837 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain