Gene : Carub.0003s1485 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1485
Name:  ? Carub.0003s1485 Secondary Identifier:  ? PAC:39242213
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1485 0.5kb upstream 0.5kb upstream 2090 true scaffold_3: 5227118-5229207 Capsella rubella
Carub.0003s1485 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5228708-5229207 Capsella rubella
Carub.0003s1485 0.5kb downstream 0.5kb downstream 2090 true scaffold_3: 5226618-5228707 Capsella rubella
Carub.0003s1485 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5226618-5227117 Capsella rubella
Carub.0003s1485 1.0kb upstream 1.0kb upstream 2590 true scaffold_3: 5227118-5229707 Capsella rubella
Carub.0003s1485 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5228708-5229707 Capsella rubella
Carub.0003s1485 1.0kb downstream 1.0kb downstream 2590 true scaffold_3: 5226118-5228707 Capsella rubella
Carub.0003s1485 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5226118-5227117 Capsella rubella
Carub.0003s1485 2.0kb upstream 2.0kb upstream 3590 true scaffold_3: 5227118-5230707 Capsella rubella
Carub.0003s1485 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5228708-5230707 Capsella rubella
Carub.0003s1485 2.0kb downstream 2.0kb downstream 3590 true scaffold_3: 5225118-5228707 Capsella rubella
Carub.0003s1485 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5225118-5227117 Capsella rubella
Carub.0003s1485 5.0kb upstream 5.0kb upstream 6590 true scaffold_3: 5227118-5233707 Capsella rubella
Carub.0003s1485 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5228708-5233707 Capsella rubella
Carub.0003s1485 5.0kb downstream 5.0kb downstream 6590 true scaffold_3: 5222118-5228707 Capsella rubella
Carub.0003s1485 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5222118-5227117 Capsella rubella
Carub.0003s1485 10.0kb upstream 10.0kb upstream 11590 true scaffold_3: 5227118-5238707 Capsella rubella
Carub.0003s1485 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5228708-5238707 Capsella rubella
Carub.0003s1485 10.0kb downstream 10.0kb downstream 11590 true scaffold_3: 5217118-5228707 Capsella rubella
Carub.0003s1485 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5217118-5227117 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366146 5261 Brassicaceae View MSA
123831176 5264 Brassicales-Malvales View MSA
124341114 5266 SBM View MSA
124242787 5268 Malvidae View MSA
124050205 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain