Gene : Carub.0003s1087 C. rubella v1.1
Defline:  (1 of 4) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  1087
Name:  ? Carub.0003s1087 Secondary Identifier:  ? PAC:39240451
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1087 0.5kb upstream 0.5kb upstream 1337 true scaffold_3: 3725815-3727151 Capsella rubella
Carub.0003s1087 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3725815-3726314 Capsella rubella
Carub.0003s1087 0.5kb downstream 0.5kb downstream 1337 true scaffold_3: 3726315-3727651 Capsella rubella
Carub.0003s1087 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3727152-3727651 Capsella rubella
Carub.0003s1087 1.0kb upstream 1.0kb upstream 1837 true scaffold_3: 3725315-3727151 Capsella rubella
Carub.0003s1087 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3725315-3726314 Capsella rubella
Carub.0003s1087 1.0kb downstream 1.0kb downstream 1837 true scaffold_3: 3726315-3728151 Capsella rubella
Carub.0003s1087 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3727152-3728151 Capsella rubella
Carub.0003s1087 2.0kb upstream 2.0kb upstream 2837 true scaffold_3: 3724315-3727151 Capsella rubella
Carub.0003s1087 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3724315-3726314 Capsella rubella
Carub.0003s1087 2.0kb downstream 2.0kb downstream 2837 true scaffold_3: 3726315-3729151 Capsella rubella
Carub.0003s1087 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3727152-3729151 Capsella rubella
Carub.0003s1087 5.0kb upstream 5.0kb upstream 5837 true scaffold_3: 3721315-3727151 Capsella rubella
Carub.0003s1087 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3721315-3726314 Capsella rubella
Carub.0003s1087 5.0kb downstream 5.0kb downstream 5837 true scaffold_3: 3726315-3732151 Capsella rubella
Carub.0003s1087 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3727152-3732151 Capsella rubella
Carub.0003s1087 10.0kb upstream 10.0kb upstream 10837 true scaffold_3: 3716315-3727151 Capsella rubella
Carub.0003s1087 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3716315-3726314 Capsella rubella
Carub.0003s1087 10.0kb downstream 10.0kb downstream 10837 true scaffold_3: 3726315-3737151 Capsella rubella
Carub.0003s1087 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3727152-3737151 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370133 5261 Brassicaceae View MSA
123840781 5264 Brassicales-Malvales View MSA
124340578 5266 SBM View MSA
124251067 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain