Gene : Carub.0003s1222 C. rubella v1.1

Defline:  (1 of 2) K14564 - nucleolar protein 56 (NOP56) Genomic Order:  1222
Name:  ? Carub.0003s1222 Secondary Identifier:  ? PAC:39239422

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1222 0.5kb upstream 0.5kb upstream 2949 true scaffold_3: 4188616-4191564 Capsella rubella
Carub.0003s1222 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4188616-4189115 Capsella rubella
Carub.0003s1222 0.5kb downstream 0.5kb downstream 2949 true scaffold_3: 4189116-4192064 Capsella rubella
Carub.0003s1222 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 4191565-4192064 Capsella rubella
Carub.0003s1222 1.0kb upstream 1.0kb upstream 3449 true scaffold_3: 4188116-4191564 Capsella rubella
Carub.0003s1222 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4188116-4189115 Capsella rubella
Carub.0003s1222 1.0kb downstream 1.0kb downstream 3449 true scaffold_3: 4189116-4192564 Capsella rubella
Carub.0003s1222 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 4191565-4192564 Capsella rubella
Carub.0003s1222 2.0kb upstream 2.0kb upstream 4449 true scaffold_3: 4187116-4191564 Capsella rubella
Carub.0003s1222 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4187116-4189115 Capsella rubella
Carub.0003s1222 2.0kb downstream 2.0kb downstream 4449 true scaffold_3: 4189116-4193564 Capsella rubella
Carub.0003s1222 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 4191565-4193564 Capsella rubella
Carub.0003s1222 5.0kb upstream 5.0kb upstream 7449 true scaffold_3: 4184116-4191564 Capsella rubella
Carub.0003s1222 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4184116-4189115 Capsella rubella
Carub.0003s1222 5.0kb downstream 5.0kb downstream 7449 true scaffold_3: 4189116-4196564 Capsella rubella
Carub.0003s1222 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 4191565-4196564 Capsella rubella
Carub.0003s1222 10.0kb upstream 10.0kb upstream 12449 true scaffold_3: 4179116-4191564 Capsella rubella
Carub.0003s1222 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4179116-4189115 Capsella rubella
Carub.0003s1222 10.0kb downstream 10.0kb downstream 12449 true scaffold_3: 4189116-4201564 Capsella rubella
Carub.0003s1222 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 4191565-4201564 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510506 5273 Angiosperm View MSA
122364777 5261 Brassicaceae View MSA
123798826 5264 Brassicales-Malvales View MSA
124296411 5266 SBM View MSA
124148573 5268 Malvidae View MSA
123874541 5270 Rosid View MSA
123458497 5271 Pentapetalae View MSA
122493902 5272 Eudicot View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain