Gene : Carub.0003s1119 C. rubella v1.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1119
Name:  ? Carub.0003s1119 Secondary Identifier:  ? PAC:39240694
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1119 0.5kb upstream 0.5kb upstream 2217 true scaffold_3: 3841473-3843689 Capsella rubella
Carub.0003s1119 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3843190-3843689 Capsella rubella
Carub.0003s1119 0.5kb downstream 0.5kb downstream 2217 true scaffold_3: 3840973-3843189 Capsella rubella
Carub.0003s1119 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3840973-3841472 Capsella rubella
Carub.0003s1119 1.0kb upstream 1.0kb upstream 2717 true scaffold_3: 3841473-3844189 Capsella rubella
Carub.0003s1119 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3843190-3844189 Capsella rubella
Carub.0003s1119 1.0kb downstream 1.0kb downstream 2717 true scaffold_3: 3840473-3843189 Capsella rubella
Carub.0003s1119 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3840473-3841472 Capsella rubella
Carub.0003s1119 2.0kb upstream 2.0kb upstream 3717 true scaffold_3: 3841473-3845189 Capsella rubella
Carub.0003s1119 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3843190-3845189 Capsella rubella
Carub.0003s1119 2.0kb downstream 2.0kb downstream 3717 true scaffold_3: 3839473-3843189 Capsella rubella
Carub.0003s1119 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3839473-3841472 Capsella rubella
Carub.0003s1119 5.0kb upstream 5.0kb upstream 6717 true scaffold_3: 3841473-3848189 Capsella rubella
Carub.0003s1119 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3843190-3848189 Capsella rubella
Carub.0003s1119 5.0kb downstream 5.0kb downstream 6717 true scaffold_3: 3836473-3843189 Capsella rubella
Carub.0003s1119 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3836473-3841472 Capsella rubella
Carub.0003s1119 10.0kb upstream 10.0kb upstream 11717 true scaffold_3: 3841473-3853189 Capsella rubella
Carub.0003s1119 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3843190-3853189 Capsella rubella
Carub.0003s1119 10.0kb downstream 10.0kb downstream 11717 true scaffold_3: 3831473-3843189 Capsella rubella
Carub.0003s1119 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3831473-3841472 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364375 5261 Brassicaceae View MSA
123839654 5264 Brassicales-Malvales View MSA
124345948 5266 SBM View MSA
124251997 5268 Malvidae View MSA
124070283 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain