Protein Family : plant U-box 23 121351063

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  858

855 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29801.t000109 (1 of 1) PTHR22849//PTHR22849:SF52 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED R. communis v0.1 1445   29801: 608751-610195
29968.t000018 (1 of 3) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1386   29968: 143729-145114
30136.t000007 (1 of 1) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1511   30136: 203660-205170
30170.t000004 (1 of 2) PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED R. communis v0.1 1356   30170: 587553-588908
30221.t000027 (1 of 2) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1390   30221: 951016-952405
30221.t000028 (1 of 1) PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1245   30221: 993838-995082
27985.t000002 (1 of 1) PTHR22849//PTHR22849:SF12 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1681   27985: 25001-26681
27637.t000005 (1 of 3) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1344   27637: 29187-30530
29333.t000005 (1 of 2) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED R. communis v0.1 1242   29333: 40777-42018
29333.t000004 (1 of 2) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1212   29333: 22467-23678
29333.t000008 (1 of 2) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED R. communis v0.1 1242   29333: 47691-48932
28246.t000003 (1 of 3) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 1311   28246: 29168-30478
Cucsa.362460 (1 of 2) PTHR22849//PTHR22849:SF23 - WDSAM1 PROTEIN C. sativus v1.0 1778   scaffold03611: 325511-327288
Cucsa.352960 (1 of 2) PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED C. sativus v1.0 2184   scaffold03533: 620543-622726
Cucsa.375310 (1 of 2) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN C. sativus v1.0 1933   scaffold03746: 265892-267824
Cucsa.174070 (1 of 2) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN C. sativus v1.0 1686   scaffold01219: 11464-13149
Cucsa.185910 (1 of 2) PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN C. sativus v1.0 1273   scaffold01274: 1308386-1309658
Cucsa.355950 (1 of 1) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN C. sativus v1.0 1226   scaffold03577: 590464-591689
Cucsa.241890 (1 of 2) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED C. sativus v1.0 1221   scaffold02047: 1748279-1749499
Cucsa.244460 (1 of 1) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED C. sativus v1.0 1263   scaffold02135: 317079-318341
Cucsa.250000 (1 of 2) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN C. sativus v1.0 1123   scaffold02219: 131408-132530
orange1.1g041252m.g (1 of 1) PTHR22849:SF6 - U-BOX DOMAIN-CONTAINING PROTEIN 30-RELATED C. sinensis v1.1 1353   scaffold00006: 787506-788858
orange1.1g041408m.g (1 of 2) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN C. sinensis v1.1 1368   scaffold00018: 752656-754023
orange1.1g014913m.g (1 of 1) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED C. sinensis v1.1 1403   scaffold00018: 761663-763065
orange1.1g038250m.g (1 of 1) PTHR22849//PTHR22849:SF9 - WDSAM1 PROTEIN C. sinensis v1.1 1335   scaffold00058: 433878-435212
orange1.1g014817m.g (1 of 1) PTHR22849:SF52 - E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED C. sinensis v1.1 1907   scaffold00065: 251736-253642
orange1.1g036338m.g (1 of 1) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN C. sinensis v1.1 1296   scaffold00078: 457746-459041
orange1.1g040073m.g (1 of 1) PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN C. sinensis v1.1 1224   scaffold00332: 65898-67121
orange1.1g015513m.g (1 of 2) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN C. sinensis v1.1 1269   scaffold00332: 84300-85568
orange1.1g015939m.g (1 of 1) PTHR22849//PTHR22849:SF12 - WDSAM1 PROTEIN C. sinensis v1.1 1977   scaffold00002: 505358-507334

858 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Brara.I00836.1.p B. rapa FPsc v1.3 121351063 plant U-box 23 19 5274 Embryophyte
30170.m013592 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
30221.m002237 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
30221.m002238 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
27985.m000839 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
27637.m000172 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
29333.m001042 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
29333.m001041 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
29333.m001045 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
28246.m000114 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
30136.m001011 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
29968.m000649 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
29801.m003164 R. communis v0.1 121351063 plant U-box 23 12 5274 Embryophyte
Cucsa.375310.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
Cucsa.362460.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
Cucsa.352960.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
Cucsa.174070.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
Cucsa.185910.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
Cucsa.355950.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
Cucsa.241890.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
Cucsa.244460.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
Cucsa.250000.1 C. sativus v1.0 121351063 plant U-box 23 9 5274 Embryophyte
orange1.1g040073m C. sinensis v1.1 121351063 plant U-box 23 9 5274 Embryophyte
orange1.1g015513m C. sinensis v1.1 121351063 plant U-box 23 9 5274 Embryophyte
orange1.1g015939m C. sinensis v1.1 121351063 plant U-box 23 9 5274 Embryophyte
orange1.1g041252m C. sinensis v1.1 121351063 plant U-box 23 9 5274 Embryophyte
orange1.1g041408m C. sinensis v1.1 121351063 plant U-box 23 9 5274 Embryophyte
orange1.1g014913m C. sinensis v1.1 121351063 plant U-box 23 9 5274 Embryophyte
orange1.1g014817m C. sinensis v1.1 121351063 plant U-box 23 9 5274 Embryophyte
orange1.1g038250m C. sinensis v1.1 121351063 plant U-box 23 9 5274 Embryophyte