Gene : Cucsa.241890 C. sativus v1.0
Defline:  (1 of 2) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  170
Name:  ? Cucsa.241890 Secondary Identifier:  ? PAC:16971084
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.241890 0.5kb upstream 0.5kb upstream 1721 true scaffold02047: 1747779-1749499 Cucumis sativus
Cucsa.241890 0.5kb upstream 0.5kb upstream 500 false scaffold02047: 1747779-1748278 Cucumis sativus
Cucsa.241890 0.5kb downstream 0.5kb downstream 1721 true scaffold02047: 1748279-1749999 Cucumis sativus
Cucsa.241890 0.5kb downstream 0.5kb downstream 500 false scaffold02047: 1749500-1749999 Cucumis sativus
Cucsa.241890 1.0kb upstream 1.0kb upstream 2221 true scaffold02047: 1747279-1749499 Cucumis sativus
Cucsa.241890 1.0kb upstream 1.0kb upstream 1000 false scaffold02047: 1747279-1748278 Cucumis sativus
Cucsa.241890 1.0kb downstream 1.0kb downstream 2221 true scaffold02047: 1748279-1750499 Cucumis sativus
Cucsa.241890 1.0kb downstream 1.0kb downstream 1000 false scaffold02047: 1749500-1750499 Cucumis sativus
Cucsa.241890 2.0kb upstream 2.0kb upstream 3221 true scaffold02047: 1746279-1749499 Cucumis sativus
Cucsa.241890 2.0kb upstream 2.0kb upstream 2000 false scaffold02047: 1746279-1748278 Cucumis sativus
Cucsa.241890 2.0kb downstream 2.0kb downstream 3221 true scaffold02047: 1748279-1751499 Cucumis sativus
Cucsa.241890 2.0kb downstream 2.0kb downstream 2000 false scaffold02047: 1749500-1751499 Cucumis sativus
Cucsa.241890 5.0kb upstream 5.0kb upstream 6221 true scaffold02047: 1743279-1749499 Cucumis sativus
Cucsa.241890 5.0kb upstream 5.0kb upstream 5000 false scaffold02047: 1743279-1748278 Cucumis sativus
Cucsa.241890 5.0kb downstream 5.0kb downstream 6221 true scaffold02047: 1748279-1754499 Cucumis sativus
Cucsa.241890 5.0kb downstream 5.0kb downstream 5000 false scaffold02047: 1749500-1754499 Cucumis sativus
Cucsa.241890 10.0kb upstream 10.0kb upstream 11221 true scaffold02047: 1738279-1749499 Cucumis sativus
Cucsa.241890 10.0kb upstream 10.0kb upstream 10000 false scaffold02047: 1738279-1748278 Cucumis sativus
Cucsa.241890 10.0kb downstream 10.0kb downstream 11221 true scaffold02047: 1748279-1759499 Cucumis sativus
Cucsa.241890 10.0kb downstream 10.0kb downstream 10000 false scaffold02047: 1749500-1759499 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314147 5265 Fabidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain